RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SVL3	Q03088	825 aa	Known RBP	6.95	□□□□□ -1.3
SKP1	YDR328C	YDL129W	Q07555	291 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	YLL007C	Q07799	665 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	REX4	Q08237	289 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	RUP1	Q12242	671 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	NSI1	Q12457	570 aa		6.95	□□□□□ -1.3
SKP1	YDR328C	TY4B-P	A0A0B7P3V8	1104 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	RPS17A	P02407	136 aa	Known RBP	6.94	□□□□□ -1.3
SKP1	YDR328C	ALG7	P07286	448 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	UNG1	P12887	359 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	RPS17B	P14127	136 aa	Known RBP	6.94	□□□□□ -1.3
SKP1	YDR328C	DAP2	P18962	818 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	IDH2	P28241	369 aa	Known RBP	6.94	□□□□□ -1.3
SKP1	YDR328C	NGG1	P32494	702 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	6.94	□□□□□ -1.3	not detected
SKP1	YDR328C	SFA1	P32771	386 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	PEX6	P33760	1030 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	SKG1	P36169	355 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	ASC1	P38011	319 aa	Known RBP	6.94	□□□□□ -1.3
SKP1	YDR328C	YHR112C	P38716	378 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	YHR218W	P38899	603 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	MTW1	P39731	289 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	FHN1	P53279	174 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	RTS3	P53289	263 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	YGR250C	P53316	781 aa	Known RBP	6.94	□□□□□ -1.3
SKP1	YDR328C	YPL071C	Q02864	156 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	MFG1	Q07684	458 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	XYL2	Q07993	356 aa		6.94	□□□□□ -1.3
SKP1	YDR328C	MST1	P07236	462 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	BCY1	P07278	416 aa	Known RBP	6.93	□□□□□ -1.3
SKP1	YDR328C	YAK1	P14680	807 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	PRP2	P20095	876 aa	Predicted RBP	6.93	□□□□□ -1.3
SKP1	YDR328C	PTP1	P25044	335 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	AGP1	P25376	633 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	CTS1	P29029	562 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	ERG1	P32476	496 aa	Known RBP	6.93	□□□□□ -1.3
SKP1	YDR328C	AST1	P35183	429 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	YBR241C	P38142	488 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	FAA2	P39518	744 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	LTP1	P40347	161 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	FMP33	P46998	180 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	UGO1	Q03327	502 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	PDR8	Q06149	701 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	RRP40	Q08285	240 aa	Known RBP	6.93	□□□□□ -1.3
SKP1	YDR328C	ULA1	Q12059	462 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	PUS9	Q12069	462 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	BMT6	Q12291	365 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	YDR262W	Q12331	272 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	RKM5	Q12367	367 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	RRP12	Q12754	1228 aa	Known RBP	6.93	□□□□□ -1.3
SKP1	YDR328C	TY4A-H	Q6Q5P6	413 aa		6.93	□□□□□ -1.3
SKP1	YDR328C	RPL1A	P0CX43	217 aa	Known RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	RPL1B	P0CX44	217 aa	Known RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	SNF5	P18480	905 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	YAP1	P19880	650 aa	Known RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	APT2	P36973	181 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	MNN2	P38069	597 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	STP2	P38704	541 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	RIX1	P38883	763 aa	Predicted RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	MNN9	P39107	395 aa	Known RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	RSP5	P39940	809 aa	Known RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	FET5	P43561	622 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	PMT4	P46971	762 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	YJL043W	P47053	257 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	RAD17	P48581	401 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	YGR016W	P53209	190 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	YKU80	Q04437	629 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	STP3	Q05937	343 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	PUN1	Q06991	263 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	COS7	Q07788	383 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	RTK1	Q12100	620 aa	Predicted RBP	6.92	□□□□□ -1.3
SKP1	YDR328C	YPR064W	Q12492	139 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	LAG2	Q92325	660 aa		6.92	□□□□□ -1.3
SKP1	YDR328C	CBP2	P03874	630 aa	Predicted RBP	6.91	□□□□□ -1.3
SKP1	YDR328C	HTA1	P04911	132 aa	Known RBP	6.91	□□□□□ -1.3
SKP1	YDR328C	STE7	P06784	515 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	CMK2	P22517	447 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	SSH4	P32343	579 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	BNA4	P38169	460 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	YIL001W	P40560	513 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	ROG1	P53118	685 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	ESF2	P53743	316 aa	Known RBP	6.91	□□□□□ -1.3
SKP1	YDR328C	DSL1	P53847	754 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	YNL095C	P53932	642 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	RRN11	Q04712	507 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	BNA5	Q05979	453 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	GPI11	Q06636	219 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	6.91	□□□□□ -1.3	not detected
SKP1	YDR328C	IRC13	Q08630	104 aa		6.91	□□□□□ -1.3
SKP1	YDR328C	LEU9	Q12166	604 aa	Known RBP	6.91	□□□□□ -1.3
SKP1	YDR328C	TOR2	P32600	2474 aa	Known RBP	6.91	□□□□□ -1.3
SKP1	YDR328C	STE6	P12866	1290 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	GAL3	P13045	520 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	YCL049C	P25577	312 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	PRO1	P32264	428 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	NUP2	P32499	720 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	UGP1	P32861	499 aa	Known RBP	6.9	□□□□□ -1.3
SKP1	YDR328C	SCO2	P38072	301 aa		6.9	□□□□□ -1.3
SKP1	YDR328C	MAP2	P38174	421 aa	Known RBP	6.9	□□□□□ -1.3
SKP1	YDR328C	RCK1	P38622	512 aa		6.9	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms