RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C YPR091CQ06833 770 aa1.42□□□□□ -2.18
YDR048CYDR048C CTI6Q08923 506 aa1.42□□□□□ -2.18
YDR048CYDR048C YPR022CQ12139 1133 aa1.42□□□□□ -2.18
YDR048CYDR048C YDL007C-AQ2V2Q0 85 aa1.42□□□□□ -2.18
YDR048CYDR048C CDC16P09798 840 aa1.41□□□□□ -2.18
YDR048CYDR048C ECM25P32525 599 aa1.41□□□□□ -2.18
YDR048CYDR048C MIG3P39943 394 aa1.41□□□□□ -2.18
YDR048CYDR048C LYS14P40971 790 aa1.41□□□□□ -2.18
YDR048CYDR048C YGL108CP53139 140 aa1.41□□□□□ -2.18
YDR048CYDR048C YGR066CP53242 292 aa1.41□□□□□ -2.18
YDR048CYDR048C ATG16Q03818 150 aa1.41□□□□□ -2.18
YDR048CYDR048C SNX3Q08826 162 aaKnown RBP1.41□□□□□ -2.18
YDR048CYDR048C RFM1Q12192 310 aa1.41□□□□□ -2.18
YDR048CYDR048C RTP1Q12751 981 aa1.41□□□□□ -2.18
YDR048CYDR048C PSK1P31374 1356 aa1.41□□□□□ -2.18
YDR048CYDR048C ATP10P18496 279 aa1.4□□□□□ -2.19
YDR048CYDR048C SLY1P22213 666 aa1.4□□□□□ -2.19
YDR048CYDR048C SPT10P35208 640 aa1.4□□□□□ -2.19
YDR048CYDR048C THI2P38141 450 aa1.4□□□□□ -2.19
YDR048CYDR048C REG2P38232 338 aa1.4□□□□□ -2.19
YDR048CYDR048C CCT2P39076 527 aaKnown RBP1.4□□□□□ -2.19
YDR048CYDR048C TFG2P41896 400 aaPredicted RBP1.4□□□□□ -2.19
YDR048CYDR048C ECM27P47144 725 aa1.4□□□□□ -2.19
YDR048CYDR048C CAF130P53280 1122 aaPredicted RBP1.4□□□□□ -2.19
YDR048CYDR048C ARE2P53629 642 aaKnown RBP1.4□□□□□ -2.19
YDR048CYDR048C TAP42Q04372 366 aa1.4□□□□□ -2.19
YDR048CYDR048C OPY2Q06810 360 aa1.4□□□□□ -2.19
YDR048CYDR048C DNL4Q08387 944 aaPredicted RBP1.4□□□□□ -2.19
YDR048CYDR048C HUA2Q12134 243 aa1.4□□□□□ -2.19
YDR048CYDR048C IZH2Q12442 317 aa1.4□□□□□ -2.19
YDR048CYDR048C PRM7Q12459 698 aa1.4□□□□□ -2.19
YDR048CYDR048C SEC39Q12745 709 aa1.4□□□□□ -2.19
YDR048CYDR048C GAL80P04387 435 aa1.39□□□□□ -2.19
YDR048CYDR048C RHO2P06781 192 aa1.39□□□□□ -2.19
YDR048CYDR048C CBP6P07253 162 aaPredicted RBP1.39□□□□□ -2.19
YDR048CYDR048C DFR1P07807 211 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
YDR048CYDR048C TIM17P39515 158 aa1.39□□□□□ -2.19
YDR048CYDR048C MDE1P47095 244 aa1.39□□□□□ -2.19
YDR048CYDR048C MEP3P53390 489 aa1.39□□□□□ -2.19
YDR048CYDR048C IOC4Q04213 475 aa1.39□□□□□ -2.19
YDR048CYDR048C NDE2Q07500 545 aa1.39□□□□□ -2.19
YDR048CYDR048C SGT1Q08446 395 aa1.39□□□□□ -2.19
YDR048CYDR048C JID1Q12350 301 aa1.39□□□□□ -2.19
YDR048CYDR048C AHC1Q12433 566 aa1.39□□□□□ -2.19
YDR048CYDR048C HIS4P00815 799 aaKnown RBP1.38□□□□□ -2.19
YDR048CYDR048C TEF1P02994 458 aaKnown RBP1.38□□□□□ -2.19
YDR048CYDR048C ARG4P04076 463 aaPredicted RBP1.38□□□□□ -2.19
YDR048CYDR048C TOP1P04786 769 aa1.38□□□□□ -2.19
YDR048CYDR048C SNT1P25357 1226 aa1.38□□□□□ -2.19
YDR048CYDR048C SMY1P32364 656 aaKnown RBP1.38□□□□□ -2.19
YDR048CYDR048C CYS4P32582 507 aaKnown RBP1.38□□□□□ -2.19
YDR048CYDR048C REC114P32841 428 aa1.38□□□□□ -2.19
YDR048CYDR048C DTR1P38125 572 aa1.38□□□□□ -2.19
YDR048CYDR048C YER186CP40101 306 aa1.38□□□□□ -2.19
YDR048CYDR048C FRE4P53746 719 aa1.38□□□□□ -2.19
YDR048CYDR048C DSL1P53847 754 aa1.38□□□□□ -2.19
YDR048CYDR048C SEC53P07283 254 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C AAT2P23542 418 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C HIR2P32480 875 aa1.37□□□□□ -2.19
YDR048CYDR048C PRP21P32524 280 aaPredicted RBP1.37□□□□□ -2.19
YDR048CYDR048C VPS24P36095 224 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C RTC2P38279 296 aa1.37□□□□□ -2.19
YDR048CYDR048C LYS1P38998 373 aaRIP-Chip data1.37□□□□□ -2.19not detected
YDR048CYDR048C ALD5P40047 520 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C JLP2P40206 208 aa1.37□□□□□ -2.19
YDR048CYDR048C TPM2P40414 161 aa1.37□□□□□ -2.19
YDR048CYDR048C MET28P40573 187 aa1.37□□□□□ -2.19
YDR048CYDR048C VMA13P41807 478 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C PET130P47065 347 aa1.37□□□□□ -2.19
YDR048CYDR048C FLC3P53121 802 aa1.37□□□□□ -2.19
YDR048CYDR048C YGR018CP53211 109 aa1.37□□□□□ -2.19
YDR048CYDR048C MKC7P53379 596 aa1.37□□□□□ -2.19
YDR048CYDR048C KTR5P53966 522 aaPredicted RBP1.37□□□□□ -2.19
YDR048CYDR048C MRPS16Q02608 121 aa1.37□□□□□ -2.19
YDR048CYDR048C VMS1Q04311 632 aaKnown RBP1.37□□□□□ -2.19
YDR048CYDR048C HSP31Q04432 237 aa1.37□□□□□ -2.19
YDR048CYDR048C RCN2Q12044 265 aa1.37□□□□□ -2.19
YDR048CYDR048C ORT1Q12375 292 aa1.37□□□□□ -2.19
YDR048CYDR048C RMD5Q12508 421 aa1.37□□□□□ -2.19
YDR048CYDR048C SEM1O94742 89 aa1.36□□□□□ -2.19
YDR048CYDR048C ADH1P00330 348 aaKnown RBP1.36□□□□□ -2.19
YDR048CYDR048C COX4P04037 155 aa1.36□□□□□ -2.19
YDR048CYDR048C RPB5P20434 215 aa1.36□□□□□ -2.19
YDR048CYDR048C PWP2P25635 923 aaKnown RBP1.36□□□□□ -2.19
YDR048CYDR048C RAD14P28519 371 aa1.36□□□□□ -2.19
YDR048CYDR048C PRR1P28708 518 aa1.36□□□□□ -2.19
YDR048CYDR048C APE2P32454 952 aaKnown RBP1.36□□□□□ -2.19
YDR048CYDR048C NIP100P33420 868 aa1.36□□□□□ -2.19
YDR048CYDR048C SEC66P33754 206 aa1.36□□□□□ -2.19
YDR048CYDR048C NOP4P37838 685 aaKnown RBP1.36□□□□□ -2.19
YDR048CYDR048C PGU1P47180 361 aa1.36□□□□□ -2.19
YDR048CYDR048C RMD9P53140 646 aaKnown RBP1.36□□□□□ -2.19
YDR048CYDR048C HST1P53685 503 aa1.36□□□□□ -2.19
YDR048CYDR048C MTQ1P53944 314 aa1.36□□□□□ -2.19
YDR048CYDR048C YDR387CQ04162 555 aa1.36□□□□□ -2.19
YDR048CYDR048C PIN3Q06449 215 aa1.36□□□□□ -2.19
YDR048CYDR048C YRM1Q12340 786 aa1.36□□□□□ -2.19
YDR048CYDR048C CBS1P14066 229 aa1.35□□□□□ -2.19
YDR048CYDR048C SPB1P25582 841 aaPredicted RBP1.35□□□□□ -2.19
YDR048CYDR048C DPH2P32461 534 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms