RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C YER078W-AQ3E7A2 54 aa3.99□□□□□ -1.77
RRI1YDL216C APE2P32454 952 aaKnown RBP3.98□□□□□ -1.77
RRI1YDL216C RML2P32611 393 aa3.98□□□□□ -1.77
RRI1YDL216C NTC20P38302 140 aaPredicted RBP3.98□□□□□ -1.77
RRI1YDL216C GPD2P41911 440 aaKnown RBP3.98□□□□□ -1.77
RRI1YDL216C YMR155WQ03795 547 aa3.98□□□□□ -1.77
RRI1YDL216C SIL1Q08199 421 aa3.98□□□□□ -1.77
RRI1YDL216C ESA1Q08649 445 aa3.98□□□□□ -1.77
RRI1YDL216C THP3Q12049 470 aaKnown RBP3.98□□□□□ -1.77
RRI1YDL216C RRG1Q12167 365 aaPredicted RBP3.98□□□□□ -1.77
RRI1YDL216C CHS1P08004 1131 aa3.97□□□□□ -1.77
RRI1YDL216C SPT15P13393 240 aaKnown RBP3.97□□□□□ -1.77
RRI1YDL216C RPI1P23250 407 aaKnown RBP3.97□□□□□ -1.77
RRI1YDL216C SPS22P25380 463 aa3.97□□□□□ -1.77
RRI1YDL216C YHR054CP38780 354 aa3.97□□□□□ -1.77
RRI1YDL216C KTR5P53966 522 aaPredicted RBP3.97□□□□□ -1.77
RRI1YDL216C HEL2Q05580 639 aaKnown RBP3.97□□□□□ -1.77
RRI1YDL216C RRP12Q12754 1228 aaKnown RBP3.97□□□□□ -1.77
RRI1YDL216C HHF1P02309 103 aaKnown RBP3.96□□□□□ -1.77
RRI1YDL216C SAM1P10659 382 aaKnown RBP3.96□□□□□ -1.77
RRI1YDL216C SAM2P19358 384 aaKnown RBP3.96□□□□□ -1.77
RRI1YDL216C PAD1P33751 242 aaKnown RBP RIP-Chip data3.96□□□□□ -1.77not detected
RRI1YDL216C YBL059WP34224 193 aa3.96□□□□□ -1.77
RRI1YDL216C MIX23P38162 196 aa3.96□□□□□ -1.77
RRI1YDL216C MST28P39552 234 aa3.96□□□□□ -1.77
RRI1YDL216C LSM5P40089 93 aaKnown RBP3.96□□□□□ -1.77
RRI1YDL216C SPG5P42933 373 aa3.96□□□□□ -1.77
RRI1YDL216C YJR011CP47086 261 aaPredicted RBP3.96□□□□□ -1.77
RRI1YDL216C COS5P47187 383 aa3.96□□□□□ -1.77
RRI1YDL216C COS7Q07788 383 aa3.96□□□□□ -1.77
RRI1YDL216C SGT1Q08446 395 aa3.96□□□□□ -1.77
RRI1YDL216C PKH2Q12236 1081 aaKnown RBP3.96□□□□□ -1.77
RRI1YDL216C YLR108CQ12259 485 aa3.96□□□□□ -1.77
RRI1YDL216C YRF1-4O13559 1382 aa3.96□□□□□ -1.78
RRI1YDL216C SEC63P14906 663 aa3.95□□□□□ -1.78
RRI1YDL216C SRV2P17555 526 aaKnown RBP3.95□□□□□ -1.78
RRI1YDL216C TIP1P27654 210 aaPredicted RBP3.95□□□□□ -1.78
RRI1YDL216C KRE2P27809 442 aa3.95□□□□□ -1.78
RRI1YDL216C DEG1P31115 442 aaKnown RBP3.95□□□□□ -1.78
RRI1YDL216C SIN4P32259 974 aa3.95□□□□□ -1.78
RRI1YDL216C YME2P32843 850 aa3.95□□□□□ -1.78
RRI1YDL216C SDH3P33421 198 aa3.95□□□□□ -1.78
RRI1YDL216C BYE1P36106 594 aa3.95□□□□□ -1.78
RRI1YDL216C PIM1P36775 1133 aa3.95□□□□□ -1.78
RRI1YDL216C SAS2P40963 338 aa3.95□□□□□ -1.78
RRI1YDL216C SSU1P41930 458 aa3.95□□□□□ -1.78
RRI1YDL216C YGL138CP53122 345 aa3.95□□□□□ -1.78
RRI1YDL216C YIF1P53845 314 aaKnown RBP3.95□□□□□ -1.78
RRI1YDL216C PBA1Q05778 276 aa3.95□□□□□ -1.78
RRI1YDL216C TIM18Q08749 192 aa3.95□□□□□ -1.78
RRI1YDL216C RAD61Q99359 647 aa3.95□□□□□ -1.78
RRI1YDL216C SUP35P05453 685 aaKnown RBP3.95□□□□□ -1.78
RRI1YDL216C YOX1P34161 385 aa3.95□□□□□ -1.78
RRI1YDL216C NDT80P38830 627 aa3.95□□□□□ -1.78
RRI1YDL216C YIL067CP40514 678 aa3.95□□□□□ -1.78
RRI1YDL216C LAM5P43560 674 aa3.95□□□□□ -1.78
RRI1YDL216C RPS0BP46654 252 aaKnown RBP3.95□□□□□ -1.78
RRI1YDL216C GOR1P53839 350 aa3.95□□□□□ -1.78
RRI1YDL216C KAP120Q02932 1032 aa3.95□□□□□ -1.78
RRI1YDL216C REX4Q08237 289 aa3.95□□□□□ -1.78
RRI1YDL216C YOR387CQ08910 206 aa3.95□□□□□ -1.78
RRI1YDL216C YPR022CQ12139 1133 aa3.95□□□□□ -1.78
RRI1YDL216C VAM3Q12241 283 aa3.95□□□□□ -1.78
RRI1YDL216C ERV2Q12284 196 aa3.95□□□□□ -1.78
RRI1YDL216C ARG4P04076 463 aaPredicted RBP3.94□□□□□ -1.78
RRI1YDL216C CPR4P25334 318 aa3.94□□□□□ -1.78
RRI1YDL216C SNT1P25357 1226 aa3.94□□□□□ -1.78
RRI1YDL216C YCR051WP25631 222 aa3.94□□□□□ -1.78
RRI1YDL216C ARO2P28777 376 aaKnown RBP3.94□□□□□ -1.78
RRI1YDL216C STB6P36085 766 aa3.94□□□□□ -1.78
RRI1YDL216C RIB5P38145 238 aa3.94□□□□□ -1.78
RRI1YDL216C RFC3P38629 340 aa3.94□□□□□ -1.78
RRI1YDL216C LYS1P38998 373 aaRIP-Chip data3.94□□□□□ -1.78not detected
RRI1YDL216C BTN2P53286 410 aa3.94□□□□□ -1.78
RRI1YDL216C YNR048WP53740 393 aa3.94□□□□□ -1.78
RRI1YDL216C SKO1Q02100 647 aa3.94□□□□□ -1.78
RRI1YDL216C ELP3Q02908 557 aaKnown RBP3.94□□□□□ -1.78
RRI1YDL216C YMR181CQ03231 154 aa3.94□□□□□ -1.78
RRI1YDL216C ARX1Q03862 593 aaKnown RBP3.94□□□□□ -1.78
RRI1YDL216C DON1Q05610 365 aa3.94□□□□□ -1.78
RRI1YDL216C BEM1P29366 551 aa3.93□□□□□ -1.78
RRI1YDL216C SDS24P38314 527 aa3.93□□□□□ -1.78
RRI1YDL216C OST1P41543 476 aaKnown RBP3.93□□□□□ -1.78
RRI1YDL216C FRE4P53746 719 aa3.93□□□□□ -1.78
RRI1YDL216C MDG1P53885 366 aa3.93□□□□□ -1.78
RRI1YDL216C RKM1Q08961 583 aaPredicted RBP3.93□□□□□ -1.78
RRI1YDL216C TEF1P02994 458 aaKnown RBP3.92□□□□□ -1.78
RRI1YDL216C NOP1P15646 327 aaKnown RBP3.92□□□□□ -1.78
RRI1YDL216C RHB1P25378 209 aa3.92□□□□□ -1.78
RRI1YDL216C HIR2P32480 875 aa3.92□□□□□ -1.78
RRI1YDL216C SWH1P35845 1188 aa3.92□□□□□ -1.78
RRI1YDL216C FAA2P39518 744 aa3.92□□□□□ -1.78
RRI1YDL216C YGR210CP42942 411 aa3.92□□□□□ -1.78
RRI1YDL216C WWM1P43582 211 aaKnown RBP3.92□□□□□ -1.78
RRI1YDL216C YGR250CP53316 781 aaKnown RBP3.92□□□□□ -1.78
RRI1YDL216C LSB5P25369 354 aa3.91□□□□□ -1.78
RRI1YDL216C NAM9P27929 486 aa3.91□□□□□ -1.78
RRI1YDL216C RFS1P38234 210 aaKnown RBP3.91□□□□□ -1.78
RRI1YDL216C HMS2P47175 358 aa3.91□□□□□ -1.78
RRI1YDL216C TOF1P53840 1238 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms