RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W TCM62P38228 572 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W VHC1P38329 1120 aa1.67□□□□□ -2.14
MSH5YDL154W MET30P39014 640 aa1.67□□□□□ -2.14
MSH5YDL154W TIF4631P39935 952 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W LSM5P40089 93 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W YGL108CP53139 140 aa1.67□□□□□ -2.14
MSH5YDL154W PKP2P53170 491 aa1.67□□□□□ -2.14
MSH5YDL154W DSL1P53847 754 aa1.67□□□□□ -2.14
MSH5YDL154W RPL15BP54780 204 aaPredicted RBP1.67□□□□□ -2.14
MSH5YDL154W SMA1Q02651 245 aa1.67□□□□□ -2.14
MSH5YDL154W MLH2Q07980 695 aa1.67□□□□□ -2.14
MSH5YDL154W CFT2Q12102 859 aaPredicted RBP1.67□□□□□ -2.14
MSH5YDL154W FLO1P32768 1537 aa1.67□□□□□ -2.14
MSH5YDL154W BAR1P12630 587 aa1.67□□□□□ -2.14
MSH5YDL154W PMS1P14242 873 aa1.67□□□□□ -2.14
MSH5YDL154W MDH1P17505 334 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
MSH5YDL154W URA4P20051 364 aa1.67□□□□□ -2.14
MSH5YDL154W ELO2P25358 347 aa1.67□□□□□ -2.14
MSH5YDL154W ERG1P32476 496 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W YME2P32843 850 aa1.67□□□□□ -2.14
MSH5YDL154W DUG2P38149 878 aa1.67□□□□□ -2.14
MSH5YDL154W ARC40P38328 384 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W BNI5P53890 448 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W SAM50P53969 484 aa1.67□□□□□ -2.14
MSH5YDL154W RHO4Q00246 291 aa1.67□□□□□ -2.14
MSH5YDL154W YMR254CQ04838 102 aa1.67□□□□□ -2.14
MSH5YDL154W DON1Q05610 365 aa1.67□□□□□ -2.14
MSH5YDL154W DIS3Q08162 1001 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W HSP42Q12329 375 aa1.67□□□□□ -2.14
MSH5YDL154W PDH1Q12428 516 aaKnown RBP1.67□□□□□ -2.14
MSH5YDL154W PDE2P06776 526 aa1.66□□□□□ -2.14
MSH5YDL154W RAD52P06778 471 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W GLN3P18494 730 aa1.66□□□□□ -2.14
MSH5YDL154W BUD14P27637 709 aa1.66□□□□□ -2.14
MSH5YDL154W ERV1P27882 189 aa1.66□□□□□ -2.14
MSH5YDL154W YIM1P28625 365 aa1.66□□□□□ -2.14
MSH5YDL154W SEC66P33754 206 aa1.66□□□□□ -2.14
MSH5YDL154W BZZ1P38822 633 aa1.66□□□□□ -2.14
MSH5YDL154W YIR014WP40570 242 aa1.66□□□□□ -2.14
MSH5YDL154W CAK1P43568 368 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W RPA49Q01080 415 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W YMR130WQ04223 302 aa1.66□□□□□ -2.14
MSH5YDL154W PHO92Q06390 306 aa1.66□□□□□ -2.14
MSH5YDL154W YEH2Q07950 538 aa1.66□□□□□ -2.14
MSH5YDL154W REX4Q08237 289 aa1.66□□□□□ -2.14
MSH5YDL154W TIP41Q12199 356 aa1.66□□□□□ -2.14
MSH5YDL154W PGA3Q12746 312 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W CTF3Q12748 733 aa1.66□□□□□ -2.14
MSH5YDL154W IRA1P18963 3092 aa1.66□□□□□ -2.14
MSH5YDL154W GPH1P06738 902 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W YAR066WP0CX18 203 aa1.66□□□□□ -2.14
MSH5YDL154W YHR214WP0CX19 203 aa1.66□□□□□ -2.14
MSH5YDL154W MNE1P24720 663 aa1.66□□□□□ -2.14
MSH5YDL154W YCP4P25349 247 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W FUN19P28003 413 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W APE2P32454 952 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W RML2P32611 393 aa1.66□□□□□ -2.14
MSH5YDL154W NIP100P33420 868 aa1.66□□□□□ -2.14
MSH5YDL154W ECM15P35195 104 aa1.66□□□□□ -2.14
MSH5YDL154W RKM3P38222 552 aa1.66□□□□□ -2.14
MSH5YDL154W GDI1P39958 451 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W SCD6P45978 349 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14 RIP-Chip
MSH5YDL154W YML6P51998 286 aa1.66□□□□□ -2.14
MSH5YDL154W NCS2P53923 493 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W MPS1P54199 764 aa1.66□□□□□ -2.14
MSH5YDL154W SKO1Q02100 647 aa1.66□□□□□ -2.14
MSH5YDL154W RBS1Q05672 457 aaKnown RBP1.66□□□□□ -2.14
MSH5YDL154W MRPL51Q06090 140 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W YOR365CQ08844 703 aa1.66□□□□□ -2.14
MSH5YDL154W YOR097CQ12274 175 aaPredicted RBP1.66□□□□□ -2.14
MSH5YDL154W ATP10P18496 279 aa1.65□□□□□ -2.15
MSH5YDL154W RPI1P23250 407 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W FRE1P32791 686 aa1.65□□□□□ -2.15
MSH5YDL154W PTR2P32901 601 aa1.65□□□□□ -2.15
MSH5YDL154W ARP1P38696 384 aa1.65□□□□□ -2.15
MSH5YDL154W YTA12P40341 825 aa1.65□□□□□ -2.15
MSH5YDL154W CSM2P40465 213 aa1.65□□□□□ -2.15
MSH5YDL154W LCB2P40970 561 aa1.65□□□□□ -2.15
MSH5YDL154W RPS0BP46654 252 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W IKS1P47042 667 aa1.65□□□□□ -2.15
MSH5YDL154W YGR111WP53265 400 aa1.65□□□□□ -2.15
MSH5YDL154W LSC1P53598 329 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W YIF1P53845 314 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W IRC15Q02733 499 aa1.65□□□□□ -2.15
MSH5YDL154W HOT1Q03213 719 aa1.65□□□□□ -2.15
MSH5YDL154W RCF1Q03713 159 aa1.65□□□□□ -2.15
MSH5YDL154W ARX1Q03862 593 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W DCS1Q06151 350 aa1.65□□□□□ -2.15
MSH5YDL154W VPS74Q06385 345 aa1.65□□□□□ -2.15
MSH5YDL154W MUM3Q08750 479 aa1.65□□□□□ -2.15
MSH5YDL154W VAM3Q12241 283 aa1.65□□□□□ -2.15
MSH5YDL154W YCR043CP25361 127 aa1.65□□□□□ -2.15
MSH5YDL154W BEM1P29366 551 aa1.65□□□□□ -2.15
MSH5YDL154W SWI3P32591 825 aa1.65□□□□□ -2.15
MSH5YDL154W THI2P38141 450 aa1.65□□□□□ -2.15
MSH5YDL154W RRT2P38332 387 aa1.65□□□□□ -2.15
MSH5YDL154W LEU5P38702 357 aa1.65□□□□□ -2.15
MSH5YDL154W OSH3P38713 996 aaKnown RBP1.65□□□□□ -2.15
MSH5YDL154W VPS52P39904 641 aa1.65□□□□□ -2.15
MSH5YDL154W ISC1P40015 477 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms