RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W PRE4P30657 266 aa2.09□□□□□ -2.08
UBP1YDL122W CTF13P35203 478 aa2.09□□□□□ -2.08
UBP1YDL122W YDR089WP38966 869 aa2.09□□□□□ -2.08
UBP1YDL122W YMR124WP39523 943 aaKnown RBP2.09□□□□□ -2.08
UBP1YDL122W MND2P40577 368 aa2.09□□□□□ -2.08
UBP1YDL122W ARC1P46672 376 aaKnown RBP2.09□□□□□ -2.08
UBP1YDL122W SEH1P53011 349 aaKnown RBP2.09□□□□□ -2.08
UBP1YDL122W BTN2P53286 410 aa2.09□□□□□ -2.08
UBP1YDL122W ASI2P53895 289 aa2.09□□□□□ -2.08
UBP1YDL122W SED5Q01590 340 aa2.09□□□□□ -2.08
UBP1YDL122W MCM21Q06675 368 aa2.09□□□□□ -2.08
UBP1YDL122W PSR1Q07800 427 aa2.09□□□□□ -2.08
UBP1YDL122W YOR352WQ08816 343 aa2.09□□□□□ -2.08
UBP1YDL122W REX3Q12090 404 aa2.09□□□□□ -2.08
UBP1YDL122W GAL7P08431 366 aa2.08□□□□□ -2.08
UBP1YDL122W RPL19AP0CX82 189 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W RPL19BP0CX83 189 aaPredicted RBP2.08□□□□□ -2.08
UBP1YDL122W EMC1P25574 760 aa2.08□□□□□ -2.08
UBP1YDL122W RPB9P27999 122 aa2.08□□□□□ -2.08
UBP1YDL122W ERG3P32353 365 aa2.08□□□□□ -2.08
UBP1YDL122W SPS19P32573 292 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W MTC7P32633 139 aa2.08□□□□□ -2.08
UBP1YDL122W YKL100CP34248 587 aa2.08□□□□□ -2.08
UBP1YDL122W YBR259WP38338 688 aa2.08□□□□□ -2.08
UBP1YDL122W MEF2P39677 819 aa2.08□□□□□ -2.08
UBP1YDL122W LSM5P40089 93 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W YNL195CP40168 261 aa2.08□□□□□ -2.08
UBP1YDL122W IST3P40565 148 aaPredicted RBP2.08□□□□□ -2.08
UBP1YDL122W BIT61P47041 543 aa2.08□□□□□ -2.08
UBP1YDL122W COG1P53079 417 aa2.08□□□□□ -2.08
UBP1YDL122W VPS75P53853 264 aa2.08□□□□□ -2.08
UBP1YDL122W GPB1Q08886 897 aa2.08□□□□□ -2.08
UBP1YDL122W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
UBP1YDL122W SWM1Q12379 170 aa2.08□□□□□ -2.08
UBP1YDL122W ISA2Q12425 185 aa2.08□□□□□ -2.08
UBP1YDL122W YLR415CO13578 112 aa2.08□□□□□ -2.08
UBP1YDL122W RPP2AP05319 106 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W CPA1P07258 411 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W LAT1P12695 482 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W AMD1P15274 810 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W ROX1P25042 368 aa2.08□□□□□ -2.08
UBP1YDL122W KRR1P25586 316 aaPredicted RBP2.08□□□□□ -2.08
UBP1YDL122W BUB3P26449 341 aa2.08□□□□□ -2.08
UBP1YDL122W CTS1P29029 562 aa2.08□□□□□ -2.08
UBP1YDL122W FAA1P30624 700 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W SFC1P33303 322 aa2.08□□□□□ -2.08
UBP1YDL122W GMH1P36125 273 aa2.08□□□□□ -2.08
UBP1YDL122W FMP46P36141 133 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W YBL029WP38201 376 aa2.08□□□□□ -2.08
UBP1YDL122W TRM7P38238 310 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W SIC1P38634 284 aa2.08□□□□□ -2.08
UBP1YDL122W DBP8P38719 431 aa2.08□□□□□ -2.08
UBP1YDL122W YHR182WP38870 785 aa2.08□□□□□ -2.08
UBP1YDL122W ECM1P39715 212 aa2.08□□□□□ -2.08
UBP1YDL122W EDC3P39998 551 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W TRS31Q03337 283 aa2.08□□□□□ -2.08
UBP1YDL122W CMS1Q07897 291 aaKnown RBP2.08□□□□□ -2.08
UBP1YDL122W MLH2Q07980 695 aa2.08□□□□□ -2.08
UBP1YDL122W MSA1Q08471 629 aa2.08□□□□□ -2.08
UBP1YDL122W AIM41Q12032 185 aa2.08□□□□□ -2.08
UBP1YDL122W UPC2Q12151 913 aa2.08□□□□□ -2.08
UBP1YDL122W RTN2Q12443 393 aa2.08□□□□□ -2.08
UBP1YDL122W Q0010Q9ZZX9 128 aa2.08□□□□□ -2.08
UBP1YDL122W SUI3P09064 285 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W PET122P10355 254 aa2.07□□□□□ -2.08
UBP1YDL122W SEC12P11655 471 aa2.07□□□□□ -2.08
UBP1YDL122W SPS100P13130 326 aa2.07□□□□□ -2.08
UBP1YDL122W MAK32P23060 363 aa2.07□□□□□ -2.08
UBP1YDL122W OCA4P25366 362 aa2.07□□□□□ -2.08
UBP1YDL122W CRM1P30822 1084 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W MRP20P32387 263 aa2.07□□□□□ -2.08
UBP1YDL122W YPT7P32939 208 aa2.07□□□□□ -2.08
UBP1YDL122W PXL1P36166 706 aa2.07□□□□□ -2.08
UBP1YDL122W YBR139WP38109 508 aa2.07□□□□□ -2.08
UBP1YDL122W PPS1P38148 807 aa2.07□□□□□ -2.08
UBP1YDL122W YHR112CP38716 378 aa2.07□□□□□ -2.08
UBP1YDL122W YJL068CP40363 299 aa2.07□□□□□ -2.08
UBP1YDL122W PAN6P40459 309 aa2.07□□□□□ -2.08
UBP1YDL122W URM1P40554 99 aaPredicted RBP2.07□□□□□ -2.08
UBP1YDL122W YPL108WQ02872 168 aaPredicted RBP2.07□□□□□ -2.08
UBP1YDL122W HMO1Q03973 246 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W RCO1Q04779 684 aa2.07□□□□□ -2.08
UBP1YDL122W YLR297WQ05899 129 aa2.07□□□□□ -2.08
UBP1YDL122W YOR376WQ08900 122 aa2.07□□□□□ -2.08
UBP1YDL122W MRH1Q12117 320 aaPredicted RBP2.07□□□□□ -2.08
UBP1YDL122W MDM32Q12171 622 aa2.07□□□□□ -2.08
UBP1YDL122W ECM3Q99252 613 aa2.07□□□□□ -2.08
UBP1YDL122W CYC1P00044 109 aaPredicted RBP2.07□□□□□ -2.08
UBP1YDL122W RPB2P08518 1224 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W TY2A-LR1P0C2J4 438 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-FP0CX61 438 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-GR2P0CX62 438 aa2.07□□□□□ -2.08
UBP1YDL122W CDC42P19073 191 aa2.07□□□□□ -2.08
UBP1YDL122W TY2A-CP25383 438 aa2.07□□□□□ -2.08
UBP1YDL122W STE14P32584 239 aa2.07□□□□□ -2.08
UBP1YDL122W CDS1P38221 457 aa2.07□□□□□ -2.08
UBP1YDL122W PRS3P38689 320 aaKnown RBP2.07□□□□□ -2.08
UBP1YDL122W YHL044WP38727 235 aa2.07□□□□□ -2.08
UBP1YDL122W PLB1P39105 664 aa2.07□□□□□ -2.08
UBP1YDL122W DJP1P40564 432 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms