RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W ATG29Q12092 213 aa4.52□□□□□ -1.69
KIN28YDL108W ISN1Q99312 450 aa4.52□□□□□ -1.69
KIN28YDL108W RPL24AP04449 155 aaKnown RBP4.51□□□□□ -1.69
KIN28YDL108W CBP1P07252 654 aa4.51□□□□□ -1.69
KIN28YDL108W PET18P25362 215 aa4.51□□□□□ -1.69
KIN28YDL108W MEI4P29467 408 aa4.51□□□□□ -1.69
KIN28YDL108W SIP1P32578 815 aa4.51□□□□□ -1.69
KIN28YDL108W GDA1P32621 518 aa4.51□□□□□ -1.69
KIN28YDL108W UBC6P33296 250 aaPredicted RBP4.51□□□□□ -1.69
KIN28YDL108W MRPL4P36517 319 aa4.51□□□□□ -1.69
KIN28YDL108W ARO9P38840 513 aaPredicted RBP4.51□□□□□ -1.69
KIN28YDL108W RFC4P40339 323 aaKnown RBP4.51□□□□□ -1.69
KIN28YDL108W LAS21P40367 830 aa4.51□□□□□ -1.69
KIN28YDL108W OPT1P40897 799 aa4.51□□□□□ -1.69
KIN28YDL108W YFL015CP43578 164 aa4.51□□□□□ -1.69
KIN28YDL108W RPA34P47006 233 aaPredicted RBP4.51□□□□□ -1.69
KIN28YDL108W ZAP1P47043 880 aa4.51□□□□□ -1.69
KIN28YDL108W HAM1P47119 197 aaKnown RBP4.51□□□□□ -1.69
KIN28YDL108W COG2P53271 262 aa4.51□□□□□ -1.69
KIN28YDL108W UBP16Q02863 499 aa4.51□□□□□ -1.69
KIN28YDL108W DCR2Q05924 578 aa4.51□□□□□ -1.69
KIN28YDL108W CDD1Q06549 142 aa4.51□□□□□ -1.69
KIN28YDL108W LEA1Q08963 238 aaPredicted RBP4.51□□□□□ -1.69
KIN28YDL108W YOR289WQ12012 251 aaPredicted RBP4.51□□□□□ -1.69
KIN28YDL108W AHA1Q12449 350 aaKnown RBP4.51□□□□□ -1.69
KIN28YDL108W RPL27AP0C2H6 136 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W RPL27BP0C2H7 136 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W RPL3P14126 387 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W COQ1P18900 473 aa4.5□□□□□ -1.69
KIN28YDL108W UBA1P22515 1024 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W ILV6P25605 309 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W KRE2P27809 442 aa4.5□□□□□ -1.69
KIN28YDL108W IDH2P28241 369 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W PRR1P28708 518 aa4.5□□□□□ -1.69
KIN28YDL108W ATP7P30902 174 aa4.5□□□□□ -1.69
KIN28YDL108W ZUO1P32527 433 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W SPR1P32603 445 aa4.5□□□□□ -1.69
KIN28YDL108W PMT1P33775 817 aa4.5□□□□□ -1.69
KIN28YDL108W CAF4P36130 643 aa4.5□□□□□ -1.69
KIN28YDL108W PFF1P38244 976 aa4.5□□□□□ -1.69
KIN28YDL108W OSH3P38713 996 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W SLZ1P40167 298 aa4.5□□□□□ -1.69
KIN28YDL108W MET28P40573 187 aa4.5□□□□□ -1.69
KIN28YDL108W CIN5P40917 295 aa4.5□□□□□ -1.69
KIN28YDL108W YJL107CP42947 387 aa4.5□□□□□ -1.69
KIN28YDL108W STB2P46679 850 aa4.5□□□□□ -1.69
KIN28YDL108W HIT1P46973 164 aa4.5□□□□□ -1.69
KIN28YDL108W APS3P47064 194 aa4.5□□□□□ -1.69
KIN28YDL108W PET130P47065 347 aa4.5□□□□□ -1.69
KIN28YDL108W COX16P47081 118 aa4.5□□□□□ -1.69
KIN28YDL108W FMS1P50264 508 aa4.5□□□□□ -1.69
KIN28YDL108W YGL185CP53100 379 aa4.5□□□□□ -1.69
KIN28YDL108W YGR066CP53242 292 aa4.5□□□□□ -1.69
KIN28YDL108W YNL092WP53934 400 aa4.5□□□□□ -1.69
KIN28YDL108W INA17Q02888 182 aa4.5□□□□□ -1.69
KIN28YDL108W YMR226CQ05016 267 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W BSC6Q08280 497 aa4.5□□□□□ -1.69
KIN28YDL108W SRO7Q12038 1033 aa4.5□□□□□ -1.69
KIN28YDL108W YRA1Q12159 226 aaKnown RBP4.5□□□□□ -1.69
KIN28YDL108W ARG4P04076 463 aaPredicted RBP4.49□□□□□ -1.69
KIN28YDL108W ILV5P06168 395 aaKnown RBP4.49□□□□□ -1.69
KIN28YDL108W DFR1P07807 211 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
KIN28YDL108W MATALPHA2P0CY08 210 aa4.49□□□□□ -1.69
KIN28YDL108W HMLALPHA2P0CY09 210 aa4.49□□□□□ -1.69
KIN28YDL108W NHP6BP11633 99 aaKnown RBP4.49□□□□□ -1.69
KIN28YDL108W AMD2P22580 549 aa4.49□□□□□ -1.69
KIN28YDL108W YSR3P23501 404 aa4.49□□□□□ -1.69
KIN28YDL108W PPA2P28239 310 aa4.49□□□□□ -1.69
KIN28YDL108W FAA1P30624 700 aaKnown RBP4.49□□□□□ -1.69
KIN28YDL108W ZIP1P31111 875 aa4.49□□□□□ -1.69
KIN28YDL108W SIN4P32259 974 aa4.49□□□□□ -1.69
KIN28YDL108W NDI1P32340 513 aa4.49□□□□□ -1.69
KIN28YDL108W CSE1P33307 960 aa4.49□□□□□ -1.69
KIN28YDL108W CST26P38226 397 aa4.49□□□□□ -1.69
KIN28YDL108W RTT107P38850 1070 aa4.49□□□□□ -1.69
KIN28YDL108W RSM25P40496 264 aa4.49□□□□□ -1.69
KIN28YDL108W ICE2P40499 491 aa4.49□□□□□ -1.69
KIN28YDL108W NMD5P46970 1048 aa4.49□□□□□ -1.69
KIN28YDL108W GLG2P47011 380 aa4.49□□□□□ -1.69
KIN28YDL108W LSM1P47017 172 aaKnown RBP4.49□□□□□ -1.69
KIN28YDL108W YJL043WP47053 257 aa4.49□□□□□ -1.69
KIN28YDL108W TMA22P47089 198 aaPredicted RBP4.49□□□□□ -1.69
KIN28YDL108W EFM3P47163 339 aa4.49□□□□□ -1.69
KIN28YDL108W TAM41P53230 385 aa4.49□□□□□ -1.69
KIN28YDL108W RRN9P53437 365 aa4.49□□□□□ -1.69
KIN28YDL108W DIA1P54005 336 aa4.49□□□□□ -1.69
KIN28YDL108W SRL4Q03085 281 aa4.49□□□□□ -1.69
KIN28YDL108W YML122CQ03207 126 aa4.49□□□□□ -1.69
KIN28YDL108W SPC24Q04477 213 aa4.49□□□□□ -1.69
KIN28YDL108W SOV1Q04748 898 aa4.49□□□□□ -1.69
KIN28YDL108W RCO1Q04779 684 aa4.49□□□□□ -1.69
KIN28YDL108W YML053CQ04978 212 aa4.49□□□□□ -1.69
KIN28YDL108W CTS2Q06350 511 aa4.49□□□□□ -1.69
KIN28YDL108W YDL242WQ07746 117 aa4.49□□□□□ -1.69
KIN28YDL108W UAF30Q08747 228 aa4.49□□□□□ -1.69
KIN28YDL108W SUL2Q12325 893 aa4.49□□□□□ -1.69
KIN28YDL108W NOT5Q12514 560 aaPredicted RBP4.49□□□□□ -1.69
KIN28YDL108W RRP12Q12754 1228 aaKnown RBP4.49□□□□□ -1.69
KIN28YDL108W YJR112W-AQ3E743 109 aa4.49□□□□□ -1.69
KIN28YDL108W PNO1Q99216 274 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 181.3 ms