RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B YDR387CQ04162 555 aa1.35□□□□□ -2.19
HTL1YCR020W-B YMR018WQ04364 514 aa1.35□□□□□ -2.19
HTL1YCR020W-B LIP2Q06005 328 aa1.35□□□□□ -2.19
HTL1YCR020W-B AHC1Q12433 566 aa1.35□□□□□ -2.19
HTL1YCR020W-B PRM7Q12459 698 aa1.35□□□□□ -2.19
HTL1YCR020W-B AVL9Q12500 764 aa1.35□□□□□ -2.19
HTL1YCR020W-B NAM2P11325 894 aa1.34□□□□□ -2.19
HTL1YCR020W-B ATP10P18496 279 aa1.34□□□□□ -2.19
HTL1YCR020W-B PRD1P25375 712 aa1.34□□□□□ -2.19
HTL1YCR020W-B IES6P32617 166 aa1.34□□□□□ -2.19
HTL1YCR020W-B MRPS9P38120 278 aa1.34□□□□□ -2.19
HTL1YCR020W-B MKC7P53379 596 aa1.34□□□□□ -2.19
HTL1YCR020W-B DSL1P53847 754 aa1.34□□□□□ -2.19
HTL1YCR020W-B NCS2P53923 493 aaPredicted RBP1.34□□□□□ -2.19
HTL1YCR020W-B FIN1Q03898 291 aa1.34□□□□□ -2.19
HTL1YCR020W-B PDS5Q04264 1277 aa1.34□□□□□ -2.19
HTL1YCR020W-B IZH2Q12442 317 aa1.34□□□□□ -2.19
HTL1YCR020W-B YJR112W-AQ3E743 109 aa1.34□□□□□ -2.19
HTL1YCR020W-B TEF1P02994 458 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B SEC53P07283 254 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B CDC16P09798 840 aa1.33□□□□□ -2.2
HTL1YCR020W-B IDH2P28241 369 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B WBP1P33767 430 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B SPT10P35208 640 aa1.33□□□□□ -2.2
HTL1YCR020W-B ARA1P38115 344 aa1.33□□□□□ -2.2
HTL1YCR020W-B MUM2P38236 366 aa1.33□□□□□ -2.2
HTL1YCR020W-B YER186CP40101 306 aa1.33□□□□□ -2.2
HTL1YCR020W-B DOT5P40553 215 aa1.33□□□□□ -2.2
HTL1YCR020W-B CHS6P40955 746 aa1.33□□□□□ -2.2
HTL1YCR020W-B YGL108CP53139 140 aa1.33□□□□□ -2.2
HTL1YCR020W-B YIF1P53845 314 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B MRD1Q06106 887 aaKnown RBP1.33□□□□□ -2.2
HTL1YCR020W-B NMD4Q12129 218 aa1.33□□□□□ -2.2
HTL1YCR020W-B RFM1Q12192 310 aa1.33□□□□□ -2.2
HTL1YCR020W-B YDL007C-AQ2V2Q0 85 aa1.33□□□□□ -2.2
HTL1YCR020W-B AFG1P32317 509 aa1.32□□□□□ -2.2
HTL1YCR020W-B APE2P32454 952 aaKnown RBP1.32□□□□□ -2.2
HTL1YCR020W-B KAR9P32526 644 aa1.32□□□□□ -2.2
HTL1YCR020W-B REC114P32841 428 aa1.32□□□□□ -2.2
HTL1YCR020W-B MUD2P36084 527 aaKnown RBP1.32□□□□□ -2.2
HTL1YCR020W-B FLC2P39719 783 aa1.32□□□□□ -2.2
HTL1YCR020W-B MRPS16Q02608 121 aa1.32□□□□□ -2.2
HTL1YCR020W-B AIM32Q04689 311 aa1.32□□□□□ -2.2
HTL1YCR020W-B PLP2Q12017 286 aa1.32□□□□□ -2.2
HTL1YCR020W-B RRD2Q12461 358 aa1.32□□□□□ -2.2
HTL1YCR020W-B RPI1P23250 407 aaKnown RBP1.31□□□□□ -2.2
HTL1YCR020W-B ECM25P32525 599 aa1.31□□□□□ -2.2
HTL1YCR020W-B RTC2P38279 296 aa1.31□□□□□ -2.2
HTL1YCR020W-B PET130P47065 347 aa1.31□□□□□ -2.2
HTL1YCR020W-B MDE1P47095 244 aa1.31□□□□□ -2.2
HTL1YCR020W-B ECM27P47144 725 aa1.31□□□□□ -2.2
HTL1YCR020W-B FLC3P53121 802 aa1.31□□□□□ -2.2
HTL1YCR020W-B YGR066CP53242 292 aa1.31□□□□□ -2.2
HTL1YCR020W-B CRH1P53301 507 aa1.31□□□□□ -2.2
HTL1YCR020W-B MEP3P53390 489 aa1.31□□□□□ -2.2
HTL1YCR020W-B KTR5P53966 522 aaPredicted RBP1.31□□□□□ -2.2
HTL1YCR020W-B RCN2Q12044 265 aa1.31□□□□□ -2.2
HTL1YCR020W-B ARG4P04076 463 aaPredicted RBP1.3□□□□□ -2.2
HTL1YCR020W-B CBS1P14066 229 aa1.3□□□□□ -2.2
HTL1YCR020W-B FMT1P32785 401 aa1.3□□□□□ -2.2
HTL1YCR020W-B LYS1P38998 373 aaRIP-Chip data1.3□□□□□ -2.2not detected
HTL1YCR020W-B RMD9P53140 646 aaKnown RBP1.3□□□□□ -2.2
HTL1YCR020W-B YNR048WP53740 393 aa1.3□□□□□ -2.2
HTL1YCR020W-B NUP116Q02630 1113 aa1.3□□□□□ -2.2
HTL1YCR020W-B VMS1Q04311 632 aaKnown RBP1.3□□□□□ -2.2
HTL1YCR020W-B HSP31Q04432 237 aa1.3□□□□□ -2.2
HTL1YCR020W-B FOB1O13329 566 aa1.29□□□□□ -2.2
HTL1YCR020W-B COX4P04037 155 aa1.29□□□□□ -2.2
HTL1YCR020W-B RHO2P06781 192 aa1.29□□□□□ -2.2
HTL1YCR020W-B AAT2P23542 418 aaKnown RBP1.29□□□□□ -2.2
HTL1YCR020W-B HIR2P32480 875 aa1.29□□□□□ -2.2
HTL1YCR020W-B CST26P38226 397 aa1.29□□□□□ -2.2
HTL1YCR020W-B YGR149WP48236 432 aa1.29□□□□□ -2.2
HTL1YCR020W-B MRX6P48564 524 aa1.29□□□□□ -2.2
HTL1YCR020W-B ARE2P53629 642 aaKnown RBP1.29□□□□□ -2.2
HTL1YCR020W-B MTQ1P53944 314 aa1.29□□□□□ -2.2
HTL1YCR020W-B NDE2Q07500 545 aa1.29□□□□□ -2.2
HTL1YCR020W-B CTI6Q08923 506 aa1.29□□□□□ -2.2
HTL1YCR020W-B YML133CQ03099 1374 aa1.29□□□□□ -2.2
HTL1YCR020W-B YLL067CQ07888 1374 aa1.29□□□□□ -2.2
HTL1YCR020W-B YLL066CQ99208 1374 aa1.29□□□□□ -2.2
HTL1YCR020W-B ADH1P00330 348 aaKnown RBP1.28□□□□□ -2.2
HTL1YCR020W-B SPB1P25582 841 aaPredicted RBP1.28□□□□□ -2.2
HTL1YCR020W-B RAD14P28519 371 aa1.28□□□□□ -2.2
HTL1YCR020W-B PRP21P32524 280 aaPredicted RBP1.28□□□□□ -2.2
HTL1YCR020W-B GYP6P32806 458 aa1.28□□□□□ -2.2
HTL1YCR020W-B MRE11P32829 692 aa1.28□□□□□ -2.2
HTL1YCR020W-B CCT2P39076 527 aaKnown RBP1.28□□□□□ -2.2
HTL1YCR020W-B OXA1P39952 402 aa1.28□□□□□ -2.2
HTL1YCR020W-B TPM2P40414 161 aa1.28□□□□□ -2.2
HTL1YCR020W-B PFS2P42841 465 aaKnown RBP1.28□□□□□ -2.2
HTL1YCR020W-B BIR1P47134 954 aa1.28□□□□□ -2.2
HTL1YCR020W-B HMS2P47175 358 aa1.28□□□□□ -2.2
HTL1YCR020W-B AZR1P50080 613 aa1.28□□□□□ -2.2
HTL1YCR020W-B RHO5P53879 331 aaKnown RBP1.28□□□□□ -2.2
HTL1YCR020W-B BET5Q03630 159 aa1.28□□□□□ -2.2
HTL1YCR020W-B SEC39Q12745 709 aa1.28□□□□□ -2.2
HTL1YCR020W-B YLR278CQ05854 1341 aa1.28□□□□□ -2.2
HTL1YCR020W-B HIS4P00815 799 aaKnown RBP1.27□□□□□ -2.21
HTL1YCR020W-B DFR1P07807 211 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms