RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C AZF1P41696 914 aa3.1□□□□□ -1.91
SHG1YBR258C DIM1P41819 318 aaKnown RBP3.1□□□□□ -1.91
SHG1YBR258C STB2P46679 850 aa3.1□□□□□ -1.91
SHG1YBR258C DUG3P53871 357 aa3.1□□□□□ -1.91
SHG1YBR258C RQC1Q05468 723 aaKnown RBP3.1□□□□□ -1.91
SHG1YBR258C YEH2Q07950 538 aa3.1□□□□□ -1.91
SHG1YBR258C HSH49Q99181 213 aaPredicted RBP3.1□□□□□ -1.91
SHG1YBR258C VPS17P32913 551 aa3.09□□□□□ -1.91
SHG1YBR258C MSN2P33748 704 aa3.09□□□□□ -1.91
SHG1YBR258C CMC1P36064 111 aa3.09□□□□□ -1.91
SHG1YBR258C RIM2P38127 377 aa3.09□□□□□ -1.91
SHG1YBR258C DUG2P38149 878 aa3.09□□□□□ -1.91
SHG1YBR258C RTT107P38850 1070 aa3.09□□□□□ -1.91
SHG1YBR258C SMF1P38925 575 aa3.09□□□□□ -1.91
SHG1YBR258C TVP23P38962 199 aa3.09□□□□□ -1.91
SHG1YBR258C YJL070CP40361 888 aa3.09□□□□□ -1.91
SHG1YBR258C VMA13P41807 478 aaKnown RBP3.09□□□□□ -1.91
SHG1YBR258C YGR266WP53326 701 aa3.09□□□□□ -1.91
SHG1YBR258C TDA7P53882 636 aaPredicted RBP3.09□□□□□ -1.91
SHG1YBR258C YMR087WQ04299 284 aa3.09□□□□□ -1.91
SHG1YBR258C YDL057WQ07379 328 aa3.09□□□□□ -1.91
SHG1YBR258C THP1Q08231 455 aa3.09□□□□□ -1.91
SHG1YBR258C PDH1Q12428 516 aaKnown RBP3.09□□□□□ -1.91
SHG1YBR258C RTN2Q12443 393 aa3.09□□□□□ -1.91
SHG1YBR258C INH1P01097 85 aa3.08□□□□□ -1.92
SHG1YBR258C MET17P06106 444 aa3.08□□□□□ -1.92
SHG1YBR258C RPL31BP0C2H9 113 aaKnown RBP3.08□□□□□ -1.92
SHG1YBR258C MRS3P10566 314 aa3.08□□□□□ -1.92
SHG1YBR258C BUD14P27637 709 aa3.08□□□□□ -1.92
SHG1YBR258C GPI10P30777 616 aa3.08□□□□□ -1.92
SHG1YBR258C UTR4P32626 227 aa3.08□□□□□ -1.92
SHG1YBR258C YME1P32795 747 aa3.08□□□□□ -1.92
SHG1YBR258C JNM1P36224 373 aa3.08□□□□□ -1.92
SHG1YBR258C AZR1P50080 613 aa3.08□□□□□ -1.92
SHG1YBR258C GYL1Q04322 720 aa3.08□□□□□ -1.92
SHG1YBR258C FMP45Q07651 309 aa3.08□□□□□ -1.92
SHG1YBR258C NDD1Q08887 554 aa3.08□□□□□ -1.92
SHG1YBR258C KEL3Q08979 651 aaPredicted RBP3.08□□□□□ -1.92
SHG1YBR258C BRR1Q99177 341 aaPredicted RBP3.08□□□□□ -1.92
SHG1YBR258C MOT1P32333 1867 aa3.07□□□□□ -1.92
SHG1YBR258C YBR056W-AI2HB52 66 aa3.07□□□□□ -1.92
SHG1YBR258C COR1P07256 457 aa3.07□□□□□ -1.92
SHG1YBR258C POX1P13711 748 aa3.07□□□□□ -1.92
SHG1YBR258C RED1P14291 827 aa3.07□□□□□ -1.92
SHG1YBR258C APE1P14904 514 aa3.07□□□□□ -1.92
SHG1YBR258C LOS1P33418 1100 aaPredicted RBP3.07□□□□□ -1.92
SHG1YBR258C BNA4P38169 460 aa3.07□□□□□ -1.92
SHG1YBR258C RRP3P38712 501 aaKnown RBP3.07□□□□□ -1.92
SHG1YBR258C OSH3P38713 996 aaKnown RBP3.07□□□□□ -1.92
SHG1YBR258C MBB1P39534 108 aa3.07□□□□□ -1.92
SHG1YBR258C YMR147WP40218 223 aaKnown RBP3.07□□□□□ -1.92
SHG1YBR258C HXT14P42833 540 aa3.07□□□□□ -1.92
SHG1YBR258C SCD6P45978 349 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SHG1YBR258C YGL039WP53183 348 aaKnown RBP3.07□□□□□ -1.92
SHG1YBR258C SLD5Q03406 294 aa3.07□□□□□ -1.92
SHG1YBR258C PDS5Q04264 1277 aa3.07□□□□□ -1.92
SHG1YBR258C GLO2Q05584 274 aa3.07□□□□□ -1.92
SHG1YBR258C YLR287CQ05881 355 aa3.07□□□□□ -1.92
SHG1YBR258C RIM20Q12033 661 aa3.07□□□□□ -1.92
SHG1YBR258C SFI1Q12369 946 aa3.07□□□□□ -1.92
SHG1YBR258C SNT1P25357 1226 aa3.06□□□□□ -1.92
SHG1YBR258C ATP11P32453 318 aa3.06□□□□□ -1.92
SHG1YBR258C MFT1P33441 392 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C SIP2P34164 415 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C YAT2P40017 923 aa3.06□□□□□ -1.92
SHG1YBR258C LSM5P40089 93 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C SAD1P43589 448 aa3.06□□□□□ -1.92
SHG1YBR258C CAF130P53280 1122 aaPredicted RBP3.06□□□□□ -1.92
SHG1YBR258C YDR239CQ03780 787 aa3.06□□□□□ -1.92
SHG1YBR258C YDR415CQ04033 374 aaPredicted RBP3.06□□□□□ -1.92
SHG1YBR258C IVY1Q04934 453 aa3.06□□□□□ -1.92
SHG1YBR258C ERP1Q05359 219 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C RBS1Q05672 457 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C IKI3Q06706 1349 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C SYO1Q07395 620 aa3.06□□□□□ -1.92
SHG1YBR258C YDL009CQ12210 107 aa3.06□□□□□ -1.92
SHG1YBR258C RRD2Q12461 358 aa3.06□□□□□ -1.92
SHG1YBR258C MEX67Q99257 599 aaKnown RBP3.06□□□□□ -1.92
SHG1YBR258C SEC16P48415 2195 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C RPP0P05317 312 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C SEC62P21825 274 aa3.05□□□□□ -1.92
SHG1YBR258C TRS65P32893 560 aa3.05□□□□□ -1.92
SHG1YBR258C PMT1P33775 817 aa3.05□□□□□ -1.92
SHG1YBR258C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SHG1YBR258C OTU2P38747 307 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C DHH1P39517 506 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C VPS52P39904 641 aa3.05□□□□□ -1.92
SHG1YBR258C YJL068CP40363 299 aa3.05□□□□□ -1.92
SHG1YBR258C MEP2P41948 499 aa3.05□□□□□ -1.92
SHG1YBR258C URB2P47108 1174 aa3.05□□□□□ -1.92
SHG1YBR258C YGL108CP53139 140 aa3.05□□□□□ -1.92
SHG1YBR258C GPI1P53306 609 aa3.05□□□□□ -1.92
SHG1YBR258C YGR250CP53316 781 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C YMR317WQ04893 1140 aa3.05□□□□□ -1.92
SHG1YBR258C LSP1Q12230 341 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C YOL159C-AQ3E769 90 aa3.05□□□□□ -1.92
SHG1YBR258C MLP1Q02455 1875 aaKnown RBP3.05□□□□□ -1.92
SHG1YBR258C SUP35P05453 685 aaKnown RBP3.04□□□□□ -1.92
SHG1YBR258C GLK1P17709 500 aaKnown RBP3.04□□□□□ -1.92
SHG1YBR258C FRE1P32791 686 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms