RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C CAF130P53280 1122 aaPredicted RBP2.32□□□□□ -2.04
RPB5YBR154C NCS2P53923 493 aaPredicted RBP2.32□□□□□ -2.04
RPB5YBR154C SLG1P54867 378 aa2.32□□□□□ -2.04
RPB5YBR154C PPM1Q04081 328 aa2.32□□□□□ -2.04
RPB5YBR154C PDS5Q04264 1277 aa2.32□□□□□ -2.04
RPB5YBR154C RCN2Q12044 265 aa2.32□□□□□ -2.04
RPB5YBR154C FOB1O13329 566 aa2.31□□□□□ -2.04
RPB5YBR154C RPL31BP0C2H9 113 aaKnown RBP2.31□□□□□ -2.04
RPB5YBR154C NFT1P0CE68 1218 aa2.31□□□□□ -2.04
RPB5YBR154C OLE1P21147 510 aaKnown RBP2.31□□□□□ -2.04
RPB5YBR154C TIP1P27654 210 aaPredicted RBP2.31□□□□□ -2.04
RPB5YBR154C NUP2P32499 720 aa2.31□□□□□ -2.04
RPB5YBR154C GYP6P32806 458 aa2.31□□□□□ -2.04
RPB5YBR154C IRC6P43615 237 aa2.31□□□□□ -2.04
RPB5YBR154C CUE5Q08412 411 aaKnown RBP2.31□□□□□ -2.04
RPB5YBR154C TIM18Q08749 192 aa2.31□□□□□ -2.04
RPB5YBR154C YBL111CQ3E7Y5 667 aa2.31□□□□□ -2.04
RPB5YBR154C TRP1P00912 224 aa2.3□□□□□ -2.04
RPB5YBR154C GCN4P03069 281 aa2.3□□□□□ -2.04
RPB5YBR154C GAL80P04387 435 aa2.3□□□□□ -2.04
RPB5YBR154C POP5P28005 173 aa2.3□□□□□ -2.04
RPB5YBR154C NFU1P32860 256 aa2.3□□□□□ -2.04
RPB5YBR154C WBP1P33767 430 aaKnown RBP2.3□□□□□ -2.04
RPB5YBR154C REG2P38232 338 aa2.3□□□□□ -2.04
RPB5YBR154C GAB1P41733 394 aa2.3□□□□□ -2.04
RPB5YBR154C YIP1P53039 248 aa2.3□□□□□ -2.04
RPB5YBR154C MTM1P53320 366 aa2.3□□□□□ -2.04
RPB5YBR154C HXT11P54862 567 aa2.3□□□□□ -2.04
RPB5YBR154C SCM3Q12334 223 aa2.3□□□□□ -2.04
RPB5YBR154C ERP4Q12450 207 aa2.3□□□□□ -2.04
RPB5YBR154C NPL6P32832 435 aa2.29□□□□□ -2.04
RPB5YBR154C VID24P38263 362 aa2.29□□□□□ -2.04
RPB5YBR154C UTP9P38882 575 aaKnown RBP2.29□□□□□ -2.04
RPB5YBR154C UTP18P40362 594 aaPredicted RBP2.29□□□□□ -2.04
RPB5YBR154C ARF3P40994 183 aaRIP-Chip data2.29□□□□□ -2.04not detected
RPB5YBR154C VTC2P43585 828 aa2.29□□□□□ -2.04
RPB5YBR154C RMD8P43620 662 aa2.29□□□□□ -2.04
RPB5YBR154C BRO1P48582 844 aa2.29□□□□□ -2.04
RPB5YBR154C PCP1P53259 346 aa2.29□□□□□ -2.04
RPB5YBR154C ARE2P53629 642 aaKnown RBP2.29□□□□□ -2.04
RPB5YBR154C DSL1P53847 754 aa2.29□□□□□ -2.04
RPB5YBR154C VPS75P53853 264 aa2.29□□□□□ -2.04
RPB5YBR154C MRPL19P53875 158 aa2.29□□□□□ -2.04
RPB5YBR154C TIM10P87108 93 aa2.29□□□□□ -2.04
RPB5YBR154C TAF11Q04226 346 aa2.29□□□□□ -2.04
RPB5YBR154C RPC11Q04307 110 aaPredicted RBP2.29□□□□□ -2.04
RPB5YBR154C YLR287CQ05881 355 aa2.29□□□□□ -2.04
RPB5YBR154C MRD1Q06106 887 aaKnown RBP2.29□□□□□ -2.04
RPB5YBR154C YDL007C-AQ2V2Q0 85 aa2.29□□□□□ -2.04
RPB5YBR154C DFR1P07807 211 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
RPB5YBR154C CKA1P15790 372 aa2.28□□□□□ -2.04
RPB5YBR154C OCA4P25366 362 aa2.28□□□□□ -2.04
RPB5YBR154C MUD1P32605 298 aaKnown RBP2.28□□□□□ -2.04
RPB5YBR154C YJR085CP47131 105 aaKnown RBP2.28□□□□□ -2.04
RPB5YBR154C VHS1Q03785 461 aa2.28□□□□□ -2.04
RPB5YBR154C SNX3Q08826 162 aaKnown RBP2.28□□□□□ -2.04
RPB5YBR154C CTI6Q08923 506 aa2.28□□□□□ -2.04
RPB5YBR154C ARG3P05150 338 aa2.27□□□□□ -2.05
RPB5YBR154C RHO2P06781 192 aa2.27□□□□□ -2.05
RPB5YBR154C FUR1P18562 216 aaKnown RBP2.27□□□□□ -2.05
RPB5YBR154C SLY1P22213 666 aa2.27□□□□□ -2.05
RPB5YBR154C MRE11P32829 692 aa2.27□□□□□ -2.05
RPB5YBR154C YKL097CP34245 136 aa2.27□□□□□ -2.05
RPB5YBR154C YMR147WP40218 223 aaKnown RBP2.27□□□□□ -2.05
RPB5YBR154C SGN1P40561 250 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
RPB5YBR154C ECM27P47144 725 aa2.27□□□□□ -2.05
RPB5YBR154C MRX6P48564 524 aa2.27□□□□□ -2.05
RPB5YBR154C YGL108CP53139 140 aa2.27□□□□□ -2.05
RPB5YBR154C RPT6Q01939 405 aaKnown RBP2.27□□□□□ -2.05
RPB5YBR154C SYF1Q04048 859 aaPredicted RBP2.27□□□□□ -2.05
RPB5YBR154C ECM11Q04110 302 aa2.27□□□□□ -2.05
RPB5YBR154C SFI1Q12369 946 aa2.27□□□□□ -2.05
RPB5YBR154C SEC39Q12745 709 aa2.27□□□□□ -2.05
RPB5YBR154C CBS1P14066 229 aa2.26□□□□□ -2.05
RPB5YBR154C RED1P14291 827 aa2.26□□□□□ -2.05
RPB5YBR154C SNT1P25357 1226 aa2.26□□□□□ -2.05
RPB5YBR154C KEL1P38853 1164 aaKnown RBP2.26□□□□□ -2.05
RPB5YBR154C AIM10P39965 576 aaKnown RBP2.26□□□□□ -2.05
RPB5YBR154C SPO22P40511 975 aa2.26□□□□□ -2.05
RPB5YBR154C DFG10P40526 253 aa2.26□□□□□ -2.05
RPB5YBR154C RMD9P53140 646 aaKnown RBP2.26□□□□□ -2.05
RPB5YBR154C YPR022CQ12139 1133 aa2.26□□□□□ -2.05
RPB5YBR154C RRG1Q12167 365 aaPredicted RBP2.26□□□□□ -2.05
RPB5YBR154C HIS4P00815 799 aaKnown RBP2.25□□□□□ -2.05
RPB5YBR154C ARG4P04076 463 aaPredicted RBP2.25□□□□□ -2.05
RPB5YBR154C MET17P06106 444 aa2.25□□□□□ -2.05
RPB5YBR154C ROX1P25042 368 aa2.25□□□□□ -2.05
RPB5YBR154C ERG3P32353 365 aa2.25□□□□□ -2.05
RPB5YBR154C ECM25P32525 599 aa2.25□□□□□ -2.05
RPB5YBR154C ARA1P38115 344 aa2.25□□□□□ -2.05
RPB5YBR154C YNR048WP53740 393 aa2.25□□□□□ -2.05
RPB5YBR154C YDR239CQ03780 787 aa2.25□□□□□ -2.05
RPB5YBR154C YDR387CQ04162 555 aa2.25□□□□□ -2.05
RPB5YBR154C SGT1Q08446 395 aa2.25□□□□□ -2.05
RPB5YBR154C YPQ1Q12010 308 aa2.25□□□□□ -2.05
RPB5YBR154C PGA3Q12746 312 aaKnown RBP2.25□□□□□ -2.05
RPB5YBR154C CCH1P50077 2039 aa2.24□□□□□ -2.05
RPB5YBR154C TEF1P02994 458 aaKnown RBP2.24□□□□□ -2.05
RPB5YBR154C PRB1P09232 635 aa2.24□□□□□ -2.05
RPB5YBR154C ATP10P18496 279 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms