RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W GLK1P17709 500 aaKnown RBP4.68□□□□□ -1.66
CKS1YBR135W HNM1P19807 563 aa4.68□□□□□ -1.66
CKS1YBR135W RAD24P32641 659 aa4.68□□□□□ -1.66
CKS1YBR135W TFB1P32776 642 aa4.68□□□□□ -1.66
CKS1YBR135W GYP6P32806 458 aa4.68□□□□□ -1.66
CKS1YBR135W APE3P37302 537 aaKnown RBP4.68□□□□□ -1.66
CKS1YBR135W NTC20P38302 140 aaPredicted RBP4.68□□□□□ -1.66
CKS1YBR135W OSH3P38713 996 aaKnown RBP4.68□□□□□ -1.66
CKS1YBR135W GPI1P53306 609 aa4.68□□□□□ -1.66
CKS1YBR135W SKO1Q02100 647 aa4.68□□□□□ -1.66
CKS1YBR135W DIG1Q03063 452 aaKnown RBP4.68□□□□□ -1.66
CKS1YBR135W RBA50Q04418 439 aa4.68□□□□□ -1.66
CKS1YBR135W SNA4Q07549 140 aa4.68□□□□□ -1.66
CKS1YBR135W GLN3P18494 730 aa4.67□□□□□ -1.66
CKS1YBR135W YCR043CP25361 127 aa4.67□□□□□ -1.66
CKS1YBR135W RPN2P32565 945 aaKnown RBP4.67□□□□□ -1.66
CKS1YBR135W NIP100P33420 868 aa4.67□□□□□ -1.66
CKS1YBR135W ARA1P38115 344 aa4.67□□□□□ -1.66
CKS1YBR135W RRT2P38332 387 aa4.67□□□□□ -1.66
CKS1YBR135W POP1P41812 875 aa4.67□□□□□ -1.66
CKS1YBR135W YGL082WP53155 381 aa4.67□□□□□ -1.66
CKS1YBR135W YDR415CQ04033 374 aaPredicted RBP4.67□□□□□ -1.66
CKS1YBR135W SXM1Q04175 944 aaKnown RBP4.67□□□□□ -1.66
CKS1YBR135W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
CKS1YBR135W LSP1Q12230 341 aaKnown RBP4.67□□□□□ -1.66
CKS1YBR135W TY3B-IQ7LHG5 1498 aaKnown RBP4.67□□□□□ -1.66
CKS1YBR135W HSP82P02829 709 aaKnown RBP4.66□□□□□ -1.66
CKS1YBR135W SEC62P21825 274 aa4.66□□□□□ -1.66
CKS1YBR135W RRP3P38712 501 aaKnown RBP4.66□□□□□ -1.66
CKS1YBR135W MET30P39014 640 aa4.66□□□□□ -1.66
CKS1YBR135W TES1P41903 349 aaKnown RBP4.66□□□□□ -1.66
CKS1YBR135W RPS0BP46654 252 aaKnown RBP4.66□□□□□ -1.66
CKS1YBR135W VPS9P54787 451 aa4.66□□□□□ -1.66
CKS1YBR135W YPL068CQ02749 293 aa4.66□□□□□ -1.66
CKS1YBR135W YEH2Q07950 538 aa4.66□□□□□ -1.66
CKS1YBR135W VAM3Q12241 283 aa4.66□□□□□ -1.66
CKS1YBR135W CSR2Q12734 1121 aa4.66□□□□□ -1.66
CKS1YBR135W YRF1-2P40105 1681 aa4.66□□□□□ -1.66
CKS1YBR135W GEX1P25596 615 aa4.65□□□□□ -1.67
CKS1YBR135W KRE2P27809 442 aa4.65□□□□□ -1.67
CKS1YBR135W FUN19P28003 413 aaPredicted RBP4.65□□□□□ -1.67
CKS1YBR135W FRE1P32791 686 aa4.65□□□□□ -1.67
CKS1YBR135W BLI1P35727 113 aa4.65□□□□□ -1.67
CKS1YBR135W SLM4P38247 162 aa4.65□□□□□ -1.67
CKS1YBR135W VHC1P38329 1120 aa4.65□□□□□ -1.67
CKS1YBR135W CCT2P39076 527 aaKnown RBP4.65□□□□□ -1.67
CKS1YBR135W VPS52P39904 641 aa4.65□□□□□ -1.67
CKS1YBR135W YND1P40009 630 aa4.65□□□□□ -1.67
CKS1YBR135W FAU1P40099 211 aa4.65□□□□□ -1.67
CKS1YBR135W YIL169CP40442 995 aa4.65□□□□□ -1.67
CKS1YBR135W BUD27P43573 796 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
CKS1YBR135W SEC5P89102 971 aa4.65□□□□□ -1.67
CKS1YBR135W FMP42Q04991 504 aa4.65□□□□□ -1.67
CKS1YBR135W MMR1Q06324 491 aa4.65□□□□□ -1.67
CKS1YBR135W SYO1Q07395 620 aa4.65□□□□□ -1.67
CKS1YBR135W SRL1Q08673 210 aa4.65□□□□□ -1.67
CKS1YBR135W AFT2Q08957 416 aa4.65□□□□□ -1.67
CKS1YBR135W RKM5Q12367 367 aa4.65□□□□□ -1.67
CKS1YBR135W HIF1Q12373 385 aa4.65□□□□□ -1.67
CKS1YBR135W YLR278CQ05854 1341 aa4.65□□□□□ -1.67
CKS1YBR135W SEC63P14906 663 aa4.64□□□□□ -1.67
CKS1YBR135W CDC60P26637 1090 aaKnown RBP4.64□□□□□ -1.67
CKS1YBR135W PRP21P32524 280 aaPredicted RBP4.64□□□□□ -1.67
CKS1YBR135W REC114P32841 428 aa4.64□□□□□ -1.67
CKS1YBR135W CBP4P37267 147 aa4.64□□□□□ -1.67
CKS1YBR135W CUL3P53202 744 aa4.64□□□□□ -1.67
CKS1YBR135W HOT1Q03213 719 aa4.64□□□□□ -1.67
CKS1YBR135W ACL4Q03771 387 aa4.64□□□□□ -1.67
CKS1YBR135W NRT1Q08485 598 aa4.64□□□□□ -1.67
CKS1YBR135W RKM1Q08961 583 aaPredicted RBP4.64□□□□□ -1.67
CKS1YBR135W YDL009CQ12210 107 aa4.64□□□□□ -1.67
CKS1YBR135W RRP5Q05022 1729 aaKnown RBP4.63□□□□□ -1.67
CKS1YBR135W LEU4P06208 619 aaKnown RBP4.63□□□□□ -1.67
CKS1YBR135W HIP1P06775 603 aa4.63□□□□□ -1.67
CKS1YBR135W SRV2P17555 526 aaKnown RBP4.63□□□□□ -1.67
CKS1YBR135W URA4P20051 364 aa4.63□□□□□ -1.67
CKS1YBR135W CLN1P20437 546 aa4.63□□□□□ -1.67
CKS1YBR135W BUB3P26449 341 aa4.63□□□□□ -1.67
CKS1YBR135W SIN4P32259 974 aa4.63□□□□□ -1.67
CKS1YBR135W HIR2P32480 875 aa4.63□□□□□ -1.67
CKS1YBR135W SIP2P34164 415 aaKnown RBP4.63□□□□□ -1.67
CKS1YBR135W YNK1P36010 153 aaKnown RBP4.63□□□□□ -1.67
CKS1YBR135W RFC3P38629 340 aa4.63□□□□□ -1.67
CKS1YBR135W NCS2P53923 493 aaPredicted RBP4.63□□□□□ -1.67
CKS1YBR135W RCF1Q03713 159 aa4.63□□□□□ -1.67
CKS1YBR135W MRPL51Q06090 140 aaPredicted RBP4.63□□□□□ -1.67
CKS1YBR135W HSP42Q12329 375 aa4.63□□□□□ -1.67
CKS1YBR135W CAR1P00812 333 aaKnown RBP4.62□□□□□ -1.67
CKS1YBR135W CDC23P16522 626 aa4.62□□□□□ -1.67
CKS1YBR135W EXO70P19658 623 aa4.62□□□□□ -1.67
CKS1YBR135W BRF1P29056 596 aa4.62□□□□□ -1.67
CKS1YBR135W TRS65P32893 560 aa4.62□□□□□ -1.67
CKS1YBR135W JEM1P40358 645 aa4.62□□□□□ -1.67
CKS1YBR135W LCB2P40970 561 aa4.62□□□□□ -1.67
CKS1YBR135W DIM1P41819 318 aaKnown RBP4.62□□□□□ -1.67
CKS1YBR135W OAZ1Q02803 292 aa4.62□□□□□ -1.67
CKS1YBR135W RLI1Q03195 608 aaKnown RBP4.62□□□□□ -1.67
CKS1YBR135W MDM30Q05930 598 aa4.62□□□□□ -1.67
CKS1YBR135W GPM3Q12326 303 aa4.62□□□□□ -1.67
CKS1YBR135W BEM1P29366 551 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms