RNA–Protein interactions for RNA: YBL066C

SEF1, Transcript of Putative transcription factor, yeastyeast

Gene SEF1, Length 3,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEF1YBL066C YMR317WQ04893 1140 aa1.92□□□□□ -2.1
SEF1YBL066C HCR1Q05775 265 aaKnown RBP1.92□□□□□ -2.1
SEF1YBL066C YDL009CQ12210 107 aa1.92□□□□□ -2.1
SEF1YBL066C ATP11P32453 318 aa1.91□□□□□ -2.1
SEF1YBL066C NPL6P32832 435 aa1.91□□□□□ -2.1
SEF1YBL066C SAS3P34218 831 aa1.91□□□□□ -2.1
SEF1YBL066C OTU2P38747 307 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C SYG1P40528 902 aa1.91□□□□□ -2.1
SEF1YBL066C VMA13P41807 478 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C GPD2P41911 440 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C YGL108CP53139 140 aa1.91□□□□□ -2.1
SEF1YBL066C GPI1P53306 609 aa1.91□□□□□ -2.1
SEF1YBL066C RRG1Q12167 365 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C RKM5Q12367 367 aa1.91□□□□□ -2.1
SEF1YBL066C BRR1Q99177 341 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C VPS13Q07878 3144 aa1.91□□□□□ -2.1
SEF1YBL066C CAR1P00812 333 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C GLK1P17709 500 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C SPB1P25582 841 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C YUR1P26725 428 aa1.91□□□□□ -2.1
SEF1YBL066C ATS1P31386 333 aa1.91□□□□□ -2.1
SEF1YBL066C PTR2P32901 601 aa1.91□□□□□ -2.1
SEF1YBL066C MRPL51Q06090 140 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C YML002WP0CF17 737 aa1.91□□□□□ -2.1
SEF1YBL066C RPL40AP0CH08 128 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C RPL40BP0CH09 128 aaKnown RBP1.91□□□□□ -2.1
SEF1YBL066C YCR022CP25620 114 aa1.91□□□□□ -2.1
SEF1YBL066C NDC1P32500 655 aa1.91□□□□□ -2.1
SEF1YBL066C RTT101P47050 842 aa1.91□□□□□ -2.1
SEF1YBL066C OCA1P50946 238 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C CRZ1P53968 678 aa1.91□□□□□ -2.1
SEF1YBL066C YMR155WQ03795 547 aa1.91□□□□□ -2.1
SEF1YBL066C KEL3Q08979 651 aaPredicted RBP1.91□□□□□ -2.1
SEF1YBL066C TIP41Q12199 356 aa1.91□□□□□ -2.1
SEF1YBL066C RPL3P14126 387 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C FUR1P18562 216 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C AFG1P32317 509 aa1.9□□□□□ -2.1
SEF1YBL066C HXT3P32466 567 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C NFU1P32860 256 aa1.9□□□□□ -2.1
SEF1YBL066C LOS1P33418 1100 aaPredicted RBP1.9□□□□□ -2.1
SEF1YBL066C FMP46P36141 133 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C DHH1P39517 506 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C LSM5P40089 93 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C POP1P41812 875 aa1.9□□□□□ -2.1
SEF1YBL066C YGL260WP53056 76 aa1.9□□□□□ -2.1
SEF1YBL066C YGR250CP53316 781 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C KTR5P53966 522 aaPredicted RBP1.9□□□□□ -2.1
SEF1YBL066C RPA49Q01080 415 aaPredicted RBP1.9□□□□□ -2.1
SEF1YBL066C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
SEF1YBL066C LSP1Q12230 341 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C RRD2Q12461 358 aa1.9□□□□□ -2.1
SEF1YBL066C RPO41P13433 1351 aaKnown RBP1.9□□□□□ -2.1
SEF1YBL066C RPL15AP05748 204 aaKnown RBP1.9□□□□□ -2.11
SEF1YBL066C MTF1P14908 341 aaKnown RBP1.9□□□□□ -2.11
SEF1YBL066C MTC4P38335 694 aaKnown RBP1.9□□□□□ -2.11
SEF1YBL066C RPR2P40571 144 aa1.9□□□□□ -2.11
SEF1YBL066C YGR149WP48236 432 aa1.9□□□□□ -2.11
SEF1YBL066C IRC15Q02733 499 aa1.9□□□□□ -2.11
SEF1YBL066C PPH22P23595 377 aa1.89□□□□□ -2.11
SEF1YBL066C CLB3P24870 427 aa1.89□□□□□ -2.11
SEF1YBL066C FAU1P40099 211 aa1.89□□□□□ -2.11
SEF1YBL066C SET6Q12529 373 aa1.89□□□□□ -2.11
SEF1YBL066C YMR230W-AQ3E7B5 62 aa1.89□□□□□ -2.11
SEF1YBL066C EXO70P19658 623 aa1.89□□□□□ -2.11
SEF1YBL066C BUB3P26449 341 aa1.89□□□□□ -2.11
SEF1YBL066C IDH2P28241 369 aaKnown RBP1.89□□□□□ -2.11
SEF1YBL066C RAD14P28519 371 aa1.89□□□□□ -2.11
SEF1YBL066C YIM1P28625 365 aa1.89□□□□□ -2.11
SEF1YBL066C SPC110P32380 944 aa1.89□□□□□ -2.11
SEF1YBL066C MFT1P33441 392 aaKnown RBP1.89□□□□□ -2.11
SEF1YBL066C BYE1P36106 594 aa1.89□□□□□ -2.11
SEF1YBL066C THI2P38141 450 aa1.89□□□□□ -2.11
SEF1YBL066C RPH1P39956 796 aa1.89□□□□□ -2.11
SEF1YBL066C ERP1Q05359 219 aaKnown RBP1.89□□□□□ -2.11
SEF1YBL066C VPS74Q06385 345 aa1.89□□□□□ -2.11
SEF1YBL066C AYT1Q12226 474 aa1.89□□□□□ -2.11
SEF1YBL066C SFI1Q12369 946 aa1.89□□□□□ -2.11
SEF1YBL066C ATP10P18496 279 aa1.89□□□□□ -2.11
SEF1YBL066C FUN19P28003 413 aaPredicted RBP1.89□□□□□ -2.11
SEF1YBL066C MPE1P35728 441 aaKnown RBP1.89□□□□□ -2.11
SEF1YBL066C TUL1P36096 758 aa1.89□□□□□ -2.11
SEF1YBL066C SHO1P40073 367 aa1.89□□□□□ -2.11
SEF1YBL066C VTC2P43585 828 aa1.89□□□□□ -2.11
SEF1YBL066C YFR016CP43597 1233 aaKnown RBP1.89□□□□□ -2.11
SEF1YBL066C GWT1P47026 490 aa1.89□□□□□ -2.11
SEF1YBL066C URB2P47108 1174 aa1.89□□□□□ -2.11
SEF1YBL066C VTA1Q06263 330 aa1.89□□□□□ -2.11
SEF1YBL066C RHO2P06781 192 aa1.88□□□□□ -2.11
SEF1YBL066C MDM31P38880 579 aa1.88□□□□□ -2.11
SEF1YBL066C HAT2P39984 401 aa1.88□□□□□ -2.11
SEF1YBL066C DLD2P46681 530 aaKnown RBP1.88□□□□□ -2.11
SEF1YBL066C ARX1Q03862 593 aaKnown RBP1.88□□□□□ -2.11
SEF1YBL066C SPC19Q03954 165 aa1.88□□□□□ -2.11
SEF1YBL066C MOT1P32333 1867 aa1.88□□□□□ -2.11
SEF1YBL066C FKS1P38631 1876 aaKnown RBP1.88□□□□□ -2.11
SEF1YBL066C HEM2P05373 342 aa1.88□□□□□ -2.11
SEF1YBL066C LEU4P06208 619 aaKnown RBP1.88□□□□□ -2.11
SEF1YBL066C SPS4P09937 338 aa1.88□□□□□ -2.11
SEF1YBL066C RPL20AP0CX23 172 aaKnown RBP1.88□□□□□ -2.11
SEF1YBL066C RPL20BP0CX24 172 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms