RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 LAMC2Q13753 1193 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 PGM5Q15124 567 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 TTC22Q5TAA0 569 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 TRAF7Q6Q0C0 670 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 STOX1Q6ZVD7 989 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 DHX37Q8IY37 1157 aaKnown RBP22.92■■□□□ 1.26
GABRD-216ENST00000640688 CCDC155Q8N6L0 562 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 PIGSQ96S52 555 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 BCAS3Q9H6U6 928 aa22.92■■□□□ 1.26
GABRD-216ENST00000640688 COL4A4P53420 1690 aaPredicted RBP22.92■■□□□ 1.26
GABRD-216ENST00000640688 CYTH3O43739 400 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 F2P00734 622 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 POU3F3P20264 500 aaPredicted RBP22.91■■□□□ 1.26
GABRD-216ENST00000640688 RBL2Q08999 1139 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 TRIM71Q2Q1W2 868 aaKnown RBP22.91■■□□□ 1.26
GABRD-216ENST00000640688 HSDL1Q3SXM5 330 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 MYSM1Q5VVJ2 828 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 UHRF1Q96T88 793 aaPredicted RBP22.91■■□□□ 1.26
GABRD-216ENST00000640688 NCOR1O75376 2440 aa22.91■■□□□ 1.26
GABRD-216ENST00000640688 TLL1O43897 1013 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 CXCL10P02778 98 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 HOXD8P13378 290 aaPredicted RBP22.9■■□□□ 1.26
GABRD-216ENST00000640688 KCNJ6P48051 423 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 KCNQ1P51787 676 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 MBTPS1Q14703 1052 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 GRM4Q14833 912 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 SKIV2LQ15477 1246 aaKnown RBP22.9■■□□□ 1.26
GABRD-216ENST00000640688 VSIG10LQ86VR7 867 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 RIOX1Q9H6W3 641 aa22.9■■□□□ 1.26
GABRD-216ENST00000640688 BDP1A6H8Y1 2624 aa22.89■■□□□ 1.26
GABRD-216ENST00000640688 KIF28PB7ZC32 967 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 LPXNO60711 386 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 GGPS1O95749 300 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 BMP1P13497 986 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 CELF3Q5SZQ8 465 aaKnown RBP22.89■■□□□ 1.25
GABRD-216ENST00000640688 ZNF618Q5T7W0 954 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 CNKSR3Q6P9H4 555 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 FCHSD1Q86WN1 690 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 SPATA33Q96N06 139 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 KATNAL1Q9BW62 490 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 DOCK5Q9H7D0 1870 aa22.89■■□□□ 1.25
GABRD-216ENST00000640688 IFIT3O14879 490 aaKnown RBP22.88■■□□□ 1.25
GABRD-216ENST00000640688 UBA1P22314 1058 aaKnown RBP22.88■■□□□ 1.25
GABRD-216ENST00000640688 PTK7Q13308 1070 aa22.88■■□□□ 1.25
GABRD-216ENST00000640688 GRB10Q13322 594 aa22.88■■□□□ 1.25
GABRD-216ENST00000640688 C16orf70Q9BSU1 422 aa22.88■■□□□ 1.25
GABRD-216ENST00000640688 MAP3K20Q9NYL2 800 aaKnown RBP22.88■■□□□ 1.25
GABRD-216ENST00000640688 GTPBP6O43824 516 aaPredicted RBP22.87■■□□□ 1.25
GABRD-216ENST00000640688 CHMLP26374 656 aa22.87■■□□□ 1.25
GABRD-216ENST00000640688 TROAPQ12815 778 aa22.87■■□□□ 1.25
GABRD-216ENST00000640688 TRDNQ13061 729 aa22.87■■□□□ 1.25
GABRD-216ENST00000640688 TSPYL2Q9H2G4 693 aaPredicted RBP22.87■■□□□ 1.25
GABRD-216ENST00000640688 E7EWF7 191 aa22.86■■□□□ 1.25
GABRD-216ENST00000640688 GCOM1H8Y6P7 765 aaPredicted RBP22.86■■□□□ 1.25
GABRD-216ENST00000640688 PPFIA4O75335 1185 aa22.86■■□□□ 1.25
GABRD-216ENST00000640688 POLR2MP0CAP2 368 aa22.86■■□□□ 1.25
GABRD-216ENST00000640688 PIBF1Q8WXW3 757 aa22.86■■□□□ 1.25
GABRD-216ENST00000640688 RAPGEFL1Q9UHV5 662 aa22.86■■□□□ 1.25
GABRD-216ENST00000640688 CCND2P30279 289 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 ANTXR2P58335 489 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 FAM117BQ6P1L5 589 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 IL27Q8NEV9 243 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 GDPD5Q8WTR4 605 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 ZBED2Q9BTP6 218 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 MTUS1Q9ULD2 1270 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 TELO2Q9Y4R8 837 aa22.85■■□□□ 1.25
GABRD-216ENST00000640688 U3KPZ7 1027 aaPredicted RBP22.85■■□□□ 1.25
GABRD-216ENST00000640688 PNMA6FA0A0J9YX94 578 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 GJB5O95377 273 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 MRPS9P82933 396 aaKnown RBP22.84■■□□□ 1.25
GABRD-216ENST00000640688 WTAPQ15007 396 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 KCNV1Q6PIU1 500 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.84■■□□□ 1.25
GABRD-216ENST00000640688 SAMD3Q8N6K7 520 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 OSBPL7Q9BZF2 842 aa22.84■■□□□ 1.25
GABRD-216ENST00000640688 SUPT16HQ9Y5B9 1047 aaKnown RBP22.84■■□□□ 1.25
GABRD-216ENST00000640688 MICAL3Q7RTP6 2002 aa22.83■■□□□ 1.25
GABRD-216ENST00000640688 ABHD14A-ACY1A0A1B0GW23 586 aa22.83■■□□□ 1.25
GABRD-216ENST00000640688 PARNO95453 639 aaKnown RBP22.83■■□□□ 1.25
GABRD-216ENST00000640688 COL9A1P20849 921 aa22.83■■□□□ 1.25
GABRD-216ENST00000640688 SEMA3FQ13275 785 aa22.83■■□□□ 1.25
GABRD-216ENST00000640688 MLXIPQ9HAP2 919 aa22.83■■□□□ 1.25
GABRD-216ENST00000640688 ERICH2A1L162 156 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 TGFB3P10600 412 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 THPOP40225 353 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 COL9A3Q14050 684 aaPredicted RBP22.82■■□□□ 1.24
GABRD-216ENST00000640688 RALYLQ86SE5 291 aaKnown RBP22.82■■□□□ 1.24
GABRD-216ENST00000640688 SERINC5Q86VE9 423 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 NCOA7Q8NI08 942 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 IGDCC4Q8TDY8 1250 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 MYL10Q9BUA6 226 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 SIP14410 1827 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 FRMPD4Q14CM0 1322 aa22.82■■□□□ 1.24
GABRD-216ENST00000640688 LINC01553A4QN01 128 aa22.81■■□□□ 1.24
GABRD-216ENST00000640688 SGSM2O43147 1006 aa22.81■■□□□ 1.24
GABRD-216ENST00000640688 LGR5O75473 907 aa22.81■■□□□ 1.24
GABRD-216ENST00000640688 LGALS2P05162 132 aa22.81■■□□□ 1.24
GABRD-216ENST00000640688 HOXC8P31273 242 aa22.81■■□□□ 1.24
GABRD-216ENST00000640688 IRX6P78412 446 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms