RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 FOXR1Q6PIV2 292 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TOM1L2Q6ZVM7 507 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 MORC4Q8TE76 937 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 KIFAP3Q92845 792 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 OLFM3Q96PB7 478 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ERGIC2Q96RQ1 377 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CHP1Q99653 195 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ELAC2Q9BQ52 826 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 LY9Q9HBG7 655 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CD248Q9HCU0 757 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 NLRC4Q9NPP4 1024 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 USP40Q9NVE5 1235 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 MCM8Q9UJA3 840 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ATP6V0A2Q9Y487 856 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 COL4A3BPQ9Y5P4 624 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PRR36Q9H6K5 1346 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 MIF4GDA9UHW6 222 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 G3V3G9 751 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 IRS4O14654 1257 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ASAP2O43150 1006 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 MAP3K7O43318 606 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SNUPNO95149 360 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 BCRP11274 1271 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ARID4AP29374 1257 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 HSPA9P38646 679 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SCTRP47872 440 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 POLR2FP61218 127 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ERVK-24P63145 666 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 DBN1Q16643 649 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 LETM2Q2VYF4 491 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 DCAF8Q5TAQ9 597 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 GSPT2Q8IYD1 628 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SMC1BQ8NDV3 1235 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 RIN2Q8WYP3 895 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CENPTQ96BT3 561 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ZNF512BQ96KM6 892 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ROPN1BQ9BZX4 212 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TRIM31Q9BZY9 425 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 DPH5Q9H2P9 285 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ROPN1Q9HAT0 212 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ATP8A1Q9Y2Q0 1164 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ANKRD26Q9UPS8 1709 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PALMO75781 387 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CHGBP05060 677 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 GSTA2P09210 222 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ITGA6P23229 1130 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 DR1Q01658 176 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 NR5A1Q13285 461 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CUL3Q13618 768 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CUL4BQ13620 913 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PROSER3Q2NL68 480 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 NFRKBQ6P4R8 1299 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PDXDC1Q6P996 788 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 KRT28Q7Z3Y7 464 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TMEM139Q8IV31 216 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 STAMBPL1Q96FJ0 436 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 AIFM3Q96NN9 605 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ECT2Q9H8V3 914 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 FGFR1OP2Q9NVK5 253 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ZSWIM5Q9P217 1185 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 FRMD4BQ9Y2L6 1034 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SPATA31D1Q6ZQQ2 1576 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 METP08581 1390 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 FOXN1O15353 648 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SLC26A4O43511 780 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SPOPO43791 374 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ORC4O43929 436 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CCNT1O60563 726 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 RHOBTB3O94955 611 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PMS2P54278 862 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 SEPT6Q14141 434 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CALCRLQ16602 461 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TRPM8Q7Z2W7 1104 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TRIM42Q8IWZ5 723 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 NME8Q8N427 588 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PIP4K2CQ8TBX8 421 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 LRRC8CQ8TDW0 803 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 LRRC59Q96AG4 307 aaKnown RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ZNF496Q96IT1 587 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 PAGR1Q9BTK6 254 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 MXD3Q9BW11 206 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 CCSER1Q9C0I3 900 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 TMEM60Q9H2L4 133 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ARPP21Q9UBL0 812 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ARMCX3Q9UH62 379 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 ASIC3Q9UHC3 531 aa5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 USP15Q9Y4E8 981 aaPredicted RBP5.47□□□□□ -1.53
HNRNPU-230ENST00000640657 O00370 1275 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 PRPF6O94906 941 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ZWINTO95229 277 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 XRCC5P13010 732 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 PLCG2P16885 1265 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 CXCR5P32302 372 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 HDLBPQ00341 1268 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ANKRD20A8PQ5CZ79 823 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 WDR78Q5VTH9 848 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 UNC13DQ70J99 1090 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 NEK8Q86SG6 692 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms