RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SYNGAP1Q96PV0 1343 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 MEIS1O00470 390 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MARCH6O60337 910 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 NEMFO60524 1076 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 STAM2O75886 525 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 KRT85P78386 507 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 OLFML2BQ68BL8 750 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 ATL3Q6DD88 541 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 SEPT14Q6ZU15 432 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 FBXO16Q8IX29 292 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
LINC00339-208ENST00000634934 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 IGLV3-22A0A075B6J6 115 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-208ENST00000634934 ARP10275 920 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 CYP2C19P33261 490 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 PRMT2P55345 433 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 IRF5Q13568 498 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MTMR1Q13613 665 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 STK38Q15208 465 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 GNPTABQ3T906 1256 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 Q4G0T1 1027 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 MBOAT7Q96N66 472 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 INPP4AQ96PE3 977 aaPredicted RBP16.35■□□□□ 0.21
LINC00339-208ENST00000634934 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 PLXNA1Q9UIW2 1896 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 CNPY2Q9Y2B0 182 aa16.35■□□□□ 0.21
LINC00339-208ENST00000634934 ESPNB1AK53 854 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 ADCY3O60266 1144 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 RGS20O76081 388 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 SETQ01105 290 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-208ENST00000634934 PTGDRQ13258 359 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-208ENST00000634934 CALCRLQ16602 461 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
LINC00339-208ENST00000634934 TRIB2Q92519 343 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 LENG9Q96B70 501 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 TMEM60Q9H2L4 133 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 KCNH7Q9NS40 1196 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 PKD2L1Q9P0L9 805 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 ZHX1Q9UKY1 873 aaPredicted RBP16.34■□□□□ 0.21
LINC00339-208ENST00000634934 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
LINC00339-208ENST00000634934 FIBPO43427 364 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 BMP15O95972 392 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
LINC00339-208ENST00000634934 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
LINC00339-208ENST00000634934 CDHR1Q96JP9 859 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 ABHD16BQ9H3Z7 469 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 VTA1Q9NP79 307 aa16.33■□□□□ 0.2
LINC00339-208ENST00000634934 MSH4O15457 936 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 GRK4P32298 578 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 TRIM32Q13049 653 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 ACVR2BQ13705 512 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 PTPAQ15257 358 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 LINC00301Q8NCQ3 95 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 GJA10Q969M2 543 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 ZNF577Q9BSK1 485 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 GDPD2Q9HCC8 539 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 PDGFCQ9NRA1 345 aa16.32■□□□□ 0.2
LINC00339-208ENST00000634934 CCDC85CA6NKD9 419 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 SPATA31C2B4DYI2 1134 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 SPTLC2O15270 562 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 MAFGO15525 162 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 YEATS4O95619 227 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
LINC00339-208ENST00000634934 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
LINC00339-208ENST00000634934 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
LINC00339-208ENST00000634934 KATNBL1Q9H079 304 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
LINC00339-208ENST00000634934 KCNMB3Q9NPA1 279 aa16.31■□□□□ 0.2
LINC00339-208ENST00000634934 IPO5O00410 1097 aaKnown RBP16.3■□□□□ 0.2
LINC00339-208ENST00000634934 LAD1O00515 517 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 CAPN15O75808 1086 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 IGHA2P01877 340 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 ICAM3P32942 547 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 TXKP42681 527 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 TTLL4Q14679 1199 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 PXYLP1Q8TE99 480 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 LEO1Q8WVC0 666 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms