RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 RETREG2Q8NC44 543 aa18■□□□□ 0.47
ATRX-217ENST00000624668 PPM1EQ8WY54 764 aa18■□□□□ 0.47
ATRX-217ENST00000624668 GAS2L1Q99501 681 aaPredicted RBP18■□□□□ 0.47
ATRX-217ENST00000624668 TRIP12Q14669 1992 aaPredicted RBP18■□□□□ 0.47
ATRX-217ENST00000624668 FRMPD4Q14CM0 1322 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 GGPS1O95749 300 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 CA3P07451 260 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
ATRX-217ENST00000624668 ZNF200P98182 395 aaPredicted RBP17.99■□□□□ 0.47
ATRX-217ENST00000624668 RBL2Q08999 1139 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 MFSD10Q14728 455 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 SART3Q15020 963 aaKnown RBP17.99■□□□□ 0.47
ATRX-217ENST00000624668 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
ATRX-217ENST00000624668 PPP2R2DQ66LE6 453 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 FTOQ9C0B1 505 aaKnown RBP eCLIP17.99■□□□□ 0.47
ATRX-217ENST00000624668 PTPRSQ13332 1948 aa17.99■□□□□ 0.47
ATRX-217ENST00000624668 PRC1O43663 620 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 PLEKHA8P1O95397 391 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 SELPP16109 830 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 SEMA3FQ13275 785 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 LRRC8DQ7L1W4 858 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 C7orf31Q8N865 590 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 CAGE1Q8TC20 777 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 SPATA33Q96N06 139 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 ESYT1Q9BSJ8 1104 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 C16orf70Q9BSU1 422 aa17.98■□□□□ 0.47
ATRX-217ENST00000624668 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 RFXAPO00287 272 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 SH2B2O14492 632 aaPredicted RBP17.97■□□□□ 0.47
ATRX-217ENST00000624668 SLC27A2O14975 620 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 NBNO60934 754 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 CKBP12277 381 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 ACTN1P12814 892 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 IGFBP4P22692 258 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 CCND2P30279 289 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 MBTPS1Q14703 1052 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 CCDC85BQ15834 202 aaPredicted RBP17.97■□□□□ 0.47
ATRX-217ENST00000624668 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 SPRED2Q7Z698 418 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 TMCO2Q7Z6W1 182 aaPredicted RBP17.97■□□□□ 0.47
ATRX-217ENST00000624668 HERC6Q8IVU3 1022 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 SLC9A7Q96T83 725 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 TELO2Q9Y4R8 837 aa17.97■□□□□ 0.47
ATRX-217ENST00000624668 DDAH1O94760 285 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 TGFB3P10600 412 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 RXRAP19793 462 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 TRAF1Q13077 416 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 USP17L6PQ6QN14 398 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 CMTR1Q8N1G2 835 aaKnown RBP17.96■□□□□ 0.47
ATRX-217ENST00000624668 SRBD1Q8N5C6 995 aaKnown RBP17.96■□□□□ 0.47
ATRX-217ENST00000624668 CCDC155Q8N6L0 562 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 INPP4AQ96PE3 977 aaPredicted RBP17.96■□□□□ 0.47
ATRX-217ENST00000624668 MAP3K14Q99558 947 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 CERS4Q9HA82 394 aa17.96■□□□□ 0.47
ATRX-217ENST00000624668 MEIS2O14770 477 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 CXCL10P02778 98 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 WDR5P61964 334 aaKnown RBP17.95■□□□□ 0.46
ATRX-217ENST00000624668 PTK7Q13308 1070 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 NECTIN1Q15223 517 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 ZNF618Q5T7W0 954 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 CTCFLQ8NI51 663 aaPredicted RBP17.95■□□□□ 0.46
ATRX-217ENST00000624668 PHOSPHO2Q8TCD6 241 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 DOCK5Q9H7D0 1870 aa17.95■□□□□ 0.46
ATRX-217ENST00000624668 SPATA31C2B4DYI2 1134 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 BAIAP3O94812 1187 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 HOXC8P31273 242 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 ICAM3P32942 547 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 DEFB103AP81534 67 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 TAP1Q03518 808 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 CREB3L3Q68CJ9 461 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
ATRX-217ENST00000624668 MTA3Q9BTC8 594 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 LRRC2Q9BYS8 371 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 RTEL1Q9NZ71 1219 aa17.94■□□□□ 0.46
ATRX-217ENST00000624668 LCHNA4D1U4 455 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 LGALS2P05162 132 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 SMARCA1P28370 1054 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 MCM5P33992 734 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 KRT40Q6A162 431 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 SERINC5Q86VE9 423 aa17.93■□□□□ 0.46
ATRX-217ENST00000624668 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 H3BRB1 525 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 KIF5BP33176 963 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 LIFRP42702 1097 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 GNPTABQ3T906 1256 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 CNKSR3Q6P9H4 555 aa17.92■□□□□ 0.46
ATRX-217ENST00000624668 NFXL1Q6ZNB6 911 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms