RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 TMEM87BQ96K49 555 aa14.05□□□□□ -0.16
PDLIM2-218ENST00000614502 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
PDLIM2-218ENST00000614502 PIGSQ96S52 555 aa14.05□□□□□ -0.16
PDLIM2-218ENST00000614502 FTOQ9C0B1 505 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDLIM2-218ENST00000614502 RBM8AQ9Y5S9 174 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-218ENST00000614502 KAT6AQ92794 2004 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 PPP1R11O60927 126 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 CALM1P0DP23 149 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 CALM2P0DP24 149 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 CALM3P0DP25 149 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 MCM5P33992 734 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 MB21D2Q8IYB1 491 aaPredicted RBP14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 IGDCC4Q8TDY8 1250 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 ATXN2LQ8WWM7 1075 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 CUL5Q93034 780 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 PPP4R2Q9NY27 417 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 SEC63Q9UGP8 760 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 RAPGEFL1Q9UHV5 662 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 BRWD1Q9NSI6 2320 aa14.04□□□□□ -0.16
PDLIM2-218ENST00000614502 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 RFXAPO00287 272 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 F2P00734 622 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 PSEN2P49810 448 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 RBL2Q08999 1139 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 MFSD10Q14728 455 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 ZNF654Q8IZM8 581 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 MICALL1Q8N3F8 863 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 ADAMTS19Q8TE59 1207 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 KAT2BQ92831 832 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 SPZ1Q9BXG8 430 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 MLXIPQ9HAP2 919 aa14.03□□□□□ -0.16
PDLIM2-218ENST00000614502 COL4A4P53420 1690 aaPredicted RBP14.02□□□□□ -0.16
PDLIM2-218ENST00000614502 EPOPA6NHQ4 379 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 HAS3O00219 553 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 CYTH3O43739 400 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 EFCAB14O75071 495 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 ARHGEF15O94989 841 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 GGPS1O95749 300 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 HOXD8P13378 290 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 SELPP16109 830 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 LIFRP42702 1097 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 KCNJ6P48051 423 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 PTK7Q13308 1070 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 NEDD9Q14511 834 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 GDF6Q6KF10 455 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 SKAP1Q86WV1 359 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 SPATA33Q96N06 139 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 TSPYL2Q9H2G4 693 aaPredicted RBP14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 CERS4Q9HA82 394 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.17
PDLIM2-218ENST00000614502 FRMPD4Q14CM0 1322 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 NOP56O00567 594 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 PRC1O43663 620 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 CA3P07451 260 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 ANTXR2P58335 489 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 MRPS5P82675 430 aaKnown RBP14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 TFF2Q03403 129 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 KRT40Q6A162 431 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 LRRC8DQ7L1W4 858 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 ESYT1Q9BSJ8 1104 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 LY9Q9HBG7 655 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 SENP2Q9HC62 589 aa14.01□□□□□ -0.17
PDLIM2-218ENST00000614502 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 PIK3CDO00329 1044 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 FIBPO43427 364 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 RGS20O76081 388 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 COL9A1P20849 921 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 UBA1P22314 1058 aaKnown RBP14□□□□□ -0.17
PDLIM2-218ENST00000614502 ICAM3P32942 547 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 CNKSR3Q6P9H4 555 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 SPRED2Q7Z698 418 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 NLRX1Q86UT6 975 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 GIMAP8Q8ND71 665 aaPredicted RBP14□□□□□ -0.17
PDLIM2-218ENST00000614502 UHRF1Q96T88 793 aaPredicted RBP14□□□□□ -0.17
PDLIM2-218ENST00000614502 USP26Q9BXU7 913 aa14□□□□□ -0.17
PDLIM2-218ENST00000614502 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
PDLIM2-218ENST00000614502 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 SLC27A2O14975 620 aa13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 ZNF286BP0CG31 522 aa13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 GNAT1P11488 350 aa13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 CKBP12277 381 aa13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
PDLIM2-218ENST00000614502 HSDL1Q3SXM5 330 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms