RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PNMA1Q8ND90 353 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 FAM227BQ96M60 508 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 VAT1LQ9HCJ6 419 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 ZMYM6O95789 1325 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 H3BQ06 376 aaPredicted RBP20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 PPFIA4O75335 1185 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 NR3C2P08235 984 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 MYCLP12524 364 aaPredicted RBP20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 TCTN1Q2MV58 587 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 EPC2Q52LR7 807 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 ASPRV1Q53RT3 343 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 DBF4BQ8NFT6 615 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 SEPT8Q92599 483 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 SPATA33Q96N06 139 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
CHMP4A-211ENST00000609024 A0A0D9SFI3 127 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 TRIM6-TRIM34B2RNG4 842 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 ZNF213O14771 459 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 DCXO43602 365 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 NT5C2P49902 561 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 ZNF200P98182 395 aaPredicted RBP20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 GPM6BQ13491 265 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 PXMP2Q9NR77 195 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 COL20A1Q9P218 1284 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 BRWD1Q9NSI6 2320 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
CHMP4A-211ENST00000609024 MUC6Q6W4X9 2439 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 C17orf102A2RUQ5 167 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 HAS3O00219 553 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 SORBS3O60504 671 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 UPP2O95045 317 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 TRIM71Q2Q1W2 868 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 QRICH1Q2TAL8 776 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 TICAM2Q86XR7 235 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 ATP6V0A1Q93050 837 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
CHMP4A-211ENST00000609024 HTRA4P83105 476 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 NMIQ13287 307 aaPredicted RBP20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 MBTPS1Q14703 1052 aa20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 AMNQ9BXJ7 453 aa20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 PCDHB15Q9Y5E8 787 aa20.2■□□□□ 0.82
CHMP4A-211ENST00000609024 H3BNC9 293 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 NCK2O43639 380 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 GGPS1O95749 300 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 MYSM1Q5VVJ2 828 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 TMEM192Q8IY95 271 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 WNT8BQ93098 351 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 RILPL2Q969X0 211 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 PABPC5Q96DU9 382 aaKnown RBP20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 NSUN3Q9H649 340 aaKnown RBP20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 CLDND1Q9NY35 253 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 PRKAG3Q9UGI9 489 aa20.19■□□□□ 0.82
CHMP4A-211ENST00000609024 MYH7BA7E2Y1 1941 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 NOP56O00567 594 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 KDM4AO75164 1064 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 GNAT1P11488 350 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 MRE11P49959 708 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 PDE1AP54750 535 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 PLEKHG4Q58EX7 1191 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 TCEAL5Q5H9L2 206 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 CELF3Q5SZQ8 465 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 ZNF589Q86UQ0 364 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 SP7Q8TDD2 431 aaPredicted RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 KCNH6Q9H252 994 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 MAP3K20Q9NYL2 800 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 NEDD4P46934 1319 aa20.18■□□□□ 0.82
CHMP4A-211ENST00000609024 PIEZO1Q92508 2521 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 H3BRB1 525 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 TGFB3P10600 412 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 HSDL1Q3SXM5 330 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 TOP1MTQ969P6 601 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 TUT1Q9H6E5 874 aaKnown RBP20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 MYH6P13533 1939 aa20.17■□□□□ 0.82
CHMP4A-211ENST00000609024 MICAL3Q7RTP6 2002 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 CAND2O75155 1236 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 CTSHP09668 335 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 CCND2P30279 289 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 TRAF1Q13077 416 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 FIBCD1Q8N539 461 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 APBB2Q92870 758 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 POP1Q99575 1024 aaKnown RBP20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 PDCD2LQ9BRP1 358 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 UBAC1Q9BSL1 405 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 JMJD4Q9H9V9 463 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 SALL3Q9BXA9 1300 aa20.16■□□□□ 0.82
CHMP4A-211ENST00000609024 SMIM10L2AP0DMW4 78 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 SMIM10L2BP0DMW5 78 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 HOXD8P13378 290 aaPredicted RBP20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 CTNNB1P35222 781 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 HSD17B4P51659 736 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 ADHFE1Q8IWW8 467 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms