RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CCDC194A0A1B0GVG4 234 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 KBTBD13C9JR72 458 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 CTAGE5O15320 804 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 FARP2O94887 1054 aaPredicted RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 GH1P01241 217 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 C6orf222P0C671 652 aaPredicted RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 GJB2P29033 226 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 ZNF76P36508 570 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 MTMR1Q13613 665 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 LAMC2Q13753 1193 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 NEDD9Q14511 834 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 NONOQ15233 471 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF40-212ENST00000602784 FSCN1Q16658 493 aaKnown RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 LY6KQ17RY6 165 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 CCSAPQ6IQ19 270 aaPredicted RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 PCSK9Q8NBP7 692 aaKnown RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 GIMAP8Q8ND71 665 aaPredicted RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 TBCKQ8TEA7 893 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 TNFRSF25Q93038 417 aa15.81■□□□□ 0.12
RNF40-212ENST00000602784 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
RNF40-212ENST00000602784 CYP3A7-CYP3A51PA0A087WV96 503 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 A6NJR5 290 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 BTBD18B2RXH4 712 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 EDIL3O43854 480 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 COL6A1P12109 1028 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 CYP3A7P24462 503 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 CPT1AP50416 773 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 SP2Q02086 613 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 ARHGAP1Q07960 439 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 SEMA3FQ13275 785 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 BRDTQ58F21 947 aaPredicted RBP15.8■□□□□ 0.12
RNF40-212ENST00000602784 GNASQ5JWF2 1037 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 CELF3Q5SZQ8 465 aaKnown RBP15.8■□□□□ 0.12
RNF40-212ENST00000602784 GJC2Q5T442 439 aaPredicted RBP15.8■□□□□ 0.12
RNF40-212ENST00000602784 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 MOXD1Q6UVY6 613 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 DIS3L2Q8IYB7 885 aaKnown RBP15.8■□□□□ 0.12
RNF40-212ENST00000602784 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 FOXP1Q9H334 677 aaPredicted RBP15.8■□□□□ 0.12
RNF40-212ENST00000602784 KCNH7Q9NS40 1196 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 PHF24Q9UPV7 400 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 MYH7BA7E2Y1 1941 aa15.8■□□□□ 0.12
RNF40-212ENST00000602784 IGLV3-22A0A075B6J6 115 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 MOXD2PA6NHM9 499 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 FAM86B1E9PN63 330 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 ZEB2O60315 1214 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 KPNA6O60684 536 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 FAM86B2P0C5J1 330 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 UBA1P22314 1058 aaKnown RBP15.79■□□□□ 0.12
RNF40-212ENST00000602784 NR5A1Q13285 461 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 KCNA10Q16322 511 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 DHX37Q8IY37 1157 aaKnown RBP15.79■□□□□ 0.12
RNF40-212ENST00000602784 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 COPS5Q92905 334 aa15.79■□□□□ 0.12
RNF40-212ENST00000602784 PAWRQ96IZ0 340 aaKnown RBP15.79■□□□□ 0.12
RNF40-212ENST00000602784 MYADML2A6NDP7 307 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 CAPN15O75808 1086 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 GGPS1O95749 300 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 KCNA2P16389 499 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 PDCP20941 246 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 ACLYP53396 1101 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 FOSBP53539 338 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 SETQ01105 290 aaPredicted RBP15.78■□□□□ 0.12
RNF40-212ENST00000602784 GUCY1B3Q02153 619 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 INF2Q27J81 1249 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 METTL7BQ6UX53 244 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 PIK3AP1Q6ZUJ8 805 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 NEK8Q86SG6 692 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 PLA2G4DQ86XP0 818 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 PPTC7Q8NI37 304 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 MBOAT7Q96N66 472 aa15.78■□□□□ 0.12
RNF40-212ENST00000602784 NAP1L4Q99733 375 aaKnown RBP15.78■□□□□ 0.12
RNF40-212ENST00000602784 ATP9AO75110 1047 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 CABYRO75952 493 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 ASGR1P07306 291 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 HOXD8P13378 290 aaPredicted RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 GCFC2P16383 781 aaKnown RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 PTGS1P23219 599 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.12
RNF40-212ENST00000602784 Q4G0T1 1027 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 PPP4R3AQ6IN85 833 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 DIS3LQ8TF46 1054 aaKnown RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 AFG1LQ8WV93 481 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 LENG9Q96B70 501 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 MLXIPQ9HAP2 919 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 AGO4Q9HCK5 861 aaKnown RBP15.77■□□□□ 0.12
RNF40-212ENST00000602784 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.12
RNF40-212ENST00000602784 NFASCO94856 1347 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 ELP1O95163 1332 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 ARP10275 920 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 IRX5P78411 483 aaPredicted RBP15.76■□□□□ 0.11
RNF40-212ENST00000602784 BEX3Q00994 111 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 DGKDQ16760 1214 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms