RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SLC4A7Q9Y6M7 1214 aa26.47■■□□□ 1.83
CCDC61-207ENST00000599044 HAS3O00219 553 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 HIC1Q14526 733 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 GPNMBQ14956 572 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 USP17L6PQ6QN14 398 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 CENPQQ7L2Z9 268 aaPredicted RBP26.46■■□□□ 1.83
CCDC61-207ENST00000599044 RETREG2Q8NC44 543 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 RRP36Q96EU6 259 aaKnown RBP26.46■■□□□ 1.83
CCDC61-207ENST00000599044 TMEM87BQ96K49 555 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 SPATA33Q96N06 139 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 PRDM12Q9H4Q4 367 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 GTF2IRD1Q9UHL9 959 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 MSRAQ9UJ68 235 aa26.46■■□□□ 1.83
CCDC61-207ENST00000599044 FRMPD4Q14CM0 1322 aa26.45■■□□□ 1.83
CCDC61-207ENST00000599044 CCDC69A6NI79 296 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 F2P00734 622 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 HOXD8P13378 290 aaPredicted RBP26.45■■□□□ 1.82
CCDC61-207ENST00000599044 KIF5BP33176 963 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 ZNF200P98182 395 aaPredicted RBP26.45■■□□□ 1.82
CCDC61-207ENST00000599044 MFSD10Q14728 455 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 RAB30Q15771 203 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 KIAA0753Q2KHM9 967 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 USP38Q8NB14 1042 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 RTEL1Q9NZ71 1219 aa26.45■■□□□ 1.82
CCDC61-207ENST00000599044 hCG_1642624A0A1W2PR95 340 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 MEIS2O14770 477 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 PFKMP08237 780 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 SMARCA1P28370 1054 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 LIFRP42702 1097 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 SEMA3FQ13275 785 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 BFSP2Q13515 415 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 KCNV1Q6PIU1 500 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 TMTC2Q8N394 836 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 C7orf31Q8N865 590 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 TELO2Q9Y4R8 837 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 CHD7Q9P2D1 2997 aa26.44■■□□□ 1.82
CCDC61-207ENST00000599044 PPFIA4O75335 1185 aa26.43■■□□□ 1.82
CCDC61-207ENST00000599044 TGFB3P10600 412 aa26.43■■□□□ 1.82
CCDC61-207ENST00000599044 ATP2A2P16615 1042 aaKnown RBP26.43■■□□□ 1.82
CCDC61-207ENST00000599044 RFC2P35250 354 aa26.43■■□□□ 1.82
CCDC61-207ENST00000599044 CCDC82Q8N4S0 544 aa26.43■■□□□ 1.82
CCDC61-207ENST00000599044 WNT8BQ93098 351 aa26.43■■□□□ 1.82
CCDC61-207ENST00000599044 TANC1Q9C0D5 1861 aa26.42■■□□□ 1.82
CCDC61-207ENST00000599044 ADGRE1Q14246 886 aa26.42■■□□□ 1.82
CCDC61-207ENST00000599044 CCDC136Q96JN2 1154 aa26.42■■□□□ 1.82
CCDC61-207ENST00000599044 INPP4AQ96PE3 977 aaPredicted RBP26.42■■□□□ 1.82
CCDC61-207ENST00000599044 LZTS2Q9BRK4 669 aa26.42■■□□□ 1.82
CCDC61-207ENST00000599044 C16orf70Q9BSU1 422 aa26.42■■□□□ 1.82
CCDC61-207ENST00000599044 FTOQ9C0B1 505 aaKnown RBP eCLIP26.42■■□□□ 1.82
CCDC61-207ENST00000599044 SPATA31C2B4DYI2 1134 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 RASEFQ8IZ41 740 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 SMARCC2Q8TAQ2 1214 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 TCEANC2Q96MN5 208 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 MLXIPQ9HAP2 919 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 SLC28A3Q9HAS3 691 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 PPP4R2Q9NY27 417 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 SLC12A7Q9Y666 1083 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 MYH7BA7E2Y1 1941 aa26.41■■□□□ 1.82
CCDC61-207ENST00000599044 NCOR1O75376 2440 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 CKBP12277 381 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 ICAM3P32942 547 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 GNAQP50148 359 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 TCTN1Q2MV58 587 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 TRIM71Q2Q1W2 868 aaKnown RBP26.4■■□□□ 1.82
CCDC61-207ENST00000599044 FANCBQ8NB91 859 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 CAGE1Q8TC20 777 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 AFAP1L1Q8TED9 768 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 KATNAL1Q9BW62 490 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 SEC63Q9UGP8 760 aaKnown RBP26.4■■□□□ 1.82
CCDC61-207ENST00000599044 PCDHA11Q9Y5I1 949 aa26.4■■□□□ 1.82
CCDC61-207ENST00000599044 TRIP12Q14669 1992 aaPredicted RBP26.39■■□□□ 1.82
CCDC61-207ENST00000599044 PIK3CDO00329 1044 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 SELPP16109 830 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 ADCK5Q3MIX3 580 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 TRAF7Q6Q0C0 670 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 TMTC3Q6ZXV5 915 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 LRRC8DQ7L1W4 858 aa26.39■■□□□ 1.82
CCDC61-207ENST00000599044 NBNO60934 754 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 CALM1P0DP23 149 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 CALM2P0DP24 149 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 CALM3P0DP25 149 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 ACTN1P12814 892 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 EXOSC10Q01780 885 aaKnown RBP26.38■■□□□ 1.81
CCDC61-207ENST00000599044 RBL2Q08999 1139 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 CYFIP1Q7L576 1253 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 SGMS1Q86VZ5 419 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 MICU3Q86XE3 530 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 CCDC155Q8N6L0 562 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 NEK1Q96PY6 1258 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 PRDM6Q9NQX0 595 aa26.38■■□□□ 1.81
CCDC61-207ENST00000599044 STAM2O75886 525 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 PTK7Q13308 1070 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 UBE2SQ16763 222 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 GNPTABQ3T906 1256 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 PCNX4Q63HM2 1172 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 PPM1EQ8WY54 764 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 CUL5Q93034 780 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 GAS2L1Q99501 681 aaPredicted RBP26.37■■□□□ 1.81
CCDC61-207ENST00000599044 PSTPIP2Q9H939 334 aa26.37■■□□□ 1.81
CCDC61-207ENST00000599044 BRPF3Q9ULD4 1205 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms