RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 PPTC7Q8NI37 304 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 AFAP1L1Q8TED9 768 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 ALG1Q9BT22 464 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
USE1-203ENST00000593597 RAPGEFL1Q9UHV5 662 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 FRMPD4Q14CM0 1322 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 B4DLN1 442 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 ZBTB5O15062 677 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 ACTN1P12814 892 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 SELPP16109 830 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
USE1-203ENST00000593597 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
USE1-203ENST00000593597 MRPS5P82675 430 aaKnown RBP12.41□□□□□ -0.42
USE1-203ENST00000593597 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 GRB10Q13322 594 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 MFSD10Q14728 455 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 DGKDQ16760 1214 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 MYSM1Q5VVJ2 828 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 RETREG2Q8NC44 543 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 ARNTL2Q8WYA1 636 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 PIGSQ96S52 555 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 RIOX1Q9H6W3 641 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 MRVI1Q9Y6F6 885 aa12.41□□□□□ -0.42
USE1-203ENST00000593597 GGPS1O95749 300 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
USE1-203ENST00000593597 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
USE1-203ENST00000593597 CHMLP26374 656 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 HOXC8P31273 242 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 TROAPQ12815 778 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
USE1-203ENST00000593597 ZNF618Q5T7W0 954 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 HOMER1Q86YM7 354 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.42
USE1-203ENST00000593597 C16orf70Q9BSU1 422 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 COL4A6Q14031 1691 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 RALGAPA2Q2PPJ7 1873 aa12.4□□□□□ -0.42
USE1-203ENST00000593597 KIAA1671Q9BY89 1806 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
USE1-203ENST00000593597 PTK7Q13308 1070 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 LAMC2Q13753 1193 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
USE1-203ENST00000593597 GDPD5Q8WTR4 605 aa12.39□□□□□ -0.43
USE1-203ENST00000593597 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 E7EWF7 191 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 TLL1O43897 1013 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
USE1-203ENST00000593597 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
USE1-203ENST00000593597 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 SPATA33Q96N06 139 aa12.38□□□□□ -0.43
USE1-203ENST00000593597 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 SGSM2O43147 1006 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 GJB5O95377 273 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 KCNJ6P48051 423 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 TRIM50Q86XT4 487 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 IGDCC4Q8TDY8 1250 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 INPP4AQ96PE3 977 aaPredicted RBP12.37□□□□□ -0.43
USE1-203ENST00000593597 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 KATNAL1Q9BW62 490 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 MAP3K20Q9NYL2 800 aaKnown RBP12.37□□□□□ -0.43
USE1-203ENST00000593597 C5orf42Q9H799 3197 aa12.37□□□□□ -0.43
USE1-203ENST00000593597 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
USE1-203ENST00000593597 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
USE1-203ENST00000593597 TREHO43280 583 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 LGALS2P05162 132 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 COL9A1P20849 921 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 CCND2P30279 289 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 WTAPQ15007 396 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
USE1-203ENST00000593597 SUGCTQ9HAC7 445 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
USE1-203ENST00000593597 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
USE1-203ENST00000593597 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 ABHD14A-ACY1A0A1B0GW23 586 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 LGR5O75473 907 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 SMIM10L2AP0DMW4 78 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 SMIM10L2BP0DMW5 78 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms