RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 SLC43A3Q8NBI5 491 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 MTMR8Q96EF0 704 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 MAP3K14Q99558 947 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 MTA3Q9BTC8 594 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 TRPV6Q9H1D0 765 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 RIOX1Q9H6W3 641 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 SENP2Q9HC62 589 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 LMCD1Q9NZU5 365 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 COL20A1Q9P218 1284 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 SLC12A7Q9Y666 1083 aa9.6□□□□□ -0.87
TPM4-211ENST00000589897 MYH7BA7E2Y1 1941 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 MYO9BQ13459 2157 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 A6NJR5 290 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 B4GALT4O60513 344 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 PPP1R11O60927 126 aaPredicted RBP9.59□□□□□ -0.87
TPM4-211ENST00000589897 CDC45O75419 566 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 PFKMP08237 780 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 CCL23P55773 120 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 FGD1P98174 961 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 LAMC2Q13753 1193 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 DGKDQ16760 1214 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 NBPF20Q3BBV1 942 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
TPM4-211ENST00000589897 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 SMARCC2Q8TAQ2 1214 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 AFG1LQ8WV93 481 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 MFSD14AQ96MC6 490 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 ALDH8A1Q9H2A2 487 aaPredicted RBP9.59□□□□□ -0.87
TPM4-211ENST00000589897 LY9Q9HBG7 655 aa9.59□□□□□ -0.87
TPM4-211ENST00000589897 GRIN2DO15399 1336 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 RFXAPO00287 272 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 SH2B2O14492 632 aaPredicted RBP9.58□□□□□ -0.88
TPM4-211ENST00000589897 CYTH3O43739 400 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 ARIH2O95376 493 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 MYOGP15173 224 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 LIFRP42702 1097 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 PGM5Q15124 567 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 NECTIN1Q15223 517 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 GNPTABQ3T906 1256 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 NFRKBQ6P4R8 1299 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 CCDC62Q6P9F0 684 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 SKAP1Q86WV1 359 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 CCDC155Q8N6L0 562 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 PHOSPHO2Q8TCD6 241 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 PRRX2Q99811 253 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 PDCD2LQ9BRP1 358 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 NOC4LQ9BVI4 516 aaKnown RBP9.58□□□□□ -0.88
TPM4-211ENST00000589897 KATNAL1Q9BW62 490 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 SPZ1Q9BXG8 430 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 LRRC2Q9BYS8 371 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 MLXIPQ9HAP2 919 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 CD320Q9NPF0 282 aa9.58□□□□□ -0.88
TPM4-211ENST00000589897 TRMT13Q9NUP7 481 aaKnown RBP9.58□□□□□ -0.88
TPM4-211ENST00000589897 DDX41Q9UJV9 622 aaKnown RBP9.58□□□□□ -0.88
TPM4-211ENST00000589897 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
TPM4-211ENST00000589897 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 OPLAHO14841 1288 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 DCXO43602 365 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 SORBS3O60504 671 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 CA3P07451 260 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 MMP3P08254 477 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 TGFB3P10600 412 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 CYP2C9P11712 490 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 RXRAP19793 462 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 SMARCA1P28370 1054 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 PTPN11Q06124 597 aaPredicted RBP9.57□□□□□ -0.88
TPM4-211ENST00000589897 ARHGAP1Q07960 439 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 BFSP2Q13515 415 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 KRT32Q14532 448 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 PTGISQ16647 500 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 VSIG10LQ86VR7 867 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 MICU3Q86XE3 530 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 RAB11FIP4Q86YS3 637 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 CCDC82Q8N4S0 544 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 SPATA33Q96N06 139 aa9.57□□□□□ -0.88
TPM4-211ENST00000589897 UPF3BQ9BZI7 483 aaKnown RBP9.57□□□□□ -0.88
TPM4-211ENST00000589897 TCF20Q9UGU0 1960 aaKnown RBP9.57□□□□□ -0.88
TPM4-211ENST00000589897 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 NOP56O00567 594 aaKnown RBP9.56□□□□□ -0.88
TPM4-211ENST00000589897 STAM2O75886 525 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 PLEKHA8P1O95397 391 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 GGPS1O95749 300 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
TPM4-211ENST00000589897 ACTN1P12814 892 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 GHRHRQ02643 423 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 SLC35G1Q2M3R5 365 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 LEXMQ3ZCV2 418 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 DEFB128Q7Z7B8 93 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 CMTR1Q8N1G2 835 aaKnown RBP9.56□□□□□ -0.88
TPM4-211ENST00000589897 FANCBQ8NB91 859 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 PPTC7Q8NI37 304 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 PPP1R13LQ8WUF5 828 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 ARNTL2Q8WYA1 636 aa9.56□□□□□ -0.88
TPM4-211ENST00000589897 SCLYQ96I15 445 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms