RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GGPS1O95749 300 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 ACTN1P12814 892 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 HOXD8P13378 290 aaPredicted RBP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 MYOGP15173 224 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 ATP2A2P16615 1042 aaKnown RBP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 UBA1P22314 1058 aaKnown RBP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 SP2Q02086 613 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 MFSD10Q14728 455 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 HSDL1Q3SXM5 330 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 MYSM1Q5VVJ2 828 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 KCNV1Q6PIU1 500 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 CCDC155Q8N6L0 562 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 CTCFLQ8NI51 663 aaPredicted RBP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 DHX38Q92620 1227 aaKnown RBP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 GPKOWQ92917 476 aaPredicted RBP eCLIP21.72■■□□□ 1.07
TRIM47-205ENST00000587774 MAP3K14Q99558 947 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 ALG1Q9BT22 464 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 HDAC6Q9UBN7 1215 aa21.72■■□□□ 1.07
TRIM47-205ENST00000587774 HAS3O00219 553 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 SH2B2O14492 632 aaPredicted RBP21.71■■□□□ 1.07
TRIM47-205ENST00000587774 SLC27A2O14975 620 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 MCM5P33992 734 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 KIAA0753Q2KHM9 967 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 CELF3Q5SZQ8 465 aaKnown RBP21.71■■□□□ 1.07
TRIM47-205ENST00000587774 PPP2R2DQ66LE6 453 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 SKAP1Q86WV1 359 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 C7orf31Q8N865 590 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 AFAP1L1Q8TED9 768 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 MTA3Q9BTC8 594 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 PCDHA11Q9Y5I1 949 aa21.71■■□□□ 1.07
TRIM47-205ENST00000587774 KIF5BP33176 963 aa21.7■■□□□ 1.06
TRIM47-205ENST00000587774 ADGRE1Q14246 886 aa21.7■■□□□ 1.06
TRIM47-205ENST00000587774 SPATA33Q96N06 139 aa21.7■■□□□ 1.06
TRIM47-205ENST00000587774 FTOQ9C0B1 505 aaKnown RBP eCLIP21.7■■□□□ 1.06
TRIM47-205ENST00000587774 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 TGFB3P10600 412 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 RXRAP19793 462 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 MRPS9P82933 396 aaKnown RBP21.69■■□□□ 1.06
TRIM47-205ENST00000587774 RBL2Q08999 1139 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 CREB3L3Q68CJ9 461 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 NFXL1Q6ZNB6 911 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 LRRC8DQ7L1W4 858 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 RRP36Q96EU6 259 aaKnown RBP21.69■■□□□ 1.06
TRIM47-205ENST00000587774 TMEM87BQ96K49 555 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 SLC9A7Q96T83 725 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 ANO2Q9NQ90 1003 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 RALGAPA2Q2PPJ7 1873 aa21.69■■□□□ 1.06
TRIM47-205ENST00000587774 ATG2AQ2TAZ0 1938 aa21.68■■□□□ 1.06
TRIM47-205ENST00000587774 MYH9P35579 1960 aaKnown RBP21.68■■□□□ 1.06
TRIM47-205ENST00000587774 NCOR1O75376 2440 aa21.68■■□□□ 1.06
TRIM47-205ENST00000587774 CCDC69A6NI79 296 aa21.68■■□□□ 1.06
TRIM47-205ENST00000587774 CKBP12277 381 aa21.68■■□□□ 1.06
TRIM47-205ENST00000587774 NECTIN1Q15223 517 aa21.68■■□□□ 1.06
TRIM47-205ENST00000587774 SEC63Q9UGP8 760 aaKnown RBP21.68■■□□□ 1.06
TRIM47-205ENST00000587774 PPFIA4O75335 1185 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 SELPP16109 830 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 SMARCA1P28370 1054 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 HIC1Q14526 733 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 GPNMBQ14956 572 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 GNPTABQ3T906 1256 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 USP17L6PQ6QN14 398 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 CMTR1Q8N1G2 835 aaKnown RBP21.67■■□□□ 1.06
TRIM47-205ENST00000587774 SRBD1Q8N5C6 995 aaKnown RBP21.67■■□□□ 1.06
TRIM47-205ENST00000587774 WNT8BQ93098 351 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 INPP4AQ96PE3 977 aaPredicted RBP21.67■■□□□ 1.06
TRIM47-205ENST00000587774 C16orf70Q9BSU1 422 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 LRRC2Q9BYS8 371 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 BCAS3Q9H6U6 928 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 MLXIPQ9HAP2 919 aa21.67■■□□□ 1.06
TRIM47-205ENST00000587774 RBAK-RBAKDNI3L0D1 243 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 STAM2O75886 525 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 BAIAP3O94812 1187 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 CA3P07451 260 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 LIFRP42702 1097 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 ZNF200P98182 395 aaPredicted RBP21.66■■□□□ 1.06
TRIM47-205ENST00000587774 SEMA3FQ13275 785 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 PTK7Q13308 1070 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 BMP2KLQ5H9B9 411 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 RAB11FIP4Q86YS3 637 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 SMARCC2Q8TAQ2 1214 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 PPM1EQ8WY54 764 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 PRDM6Q9NQX0 595 aa21.66■■□□□ 1.06
TRIM47-205ENST00000587774 PIK3CDO00329 1044 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 MEIS2O14770 477 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 IGFBP4P22692 258 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 ICAM3P32942 547 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 GNAQP50148 359 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 TRIM71Q2Q1W2 868 aaKnown RBP21.65■■□□□ 1.06
TRIM47-205ENST00000587774 CENPQQ7L2Z9 268 aaPredicted RBP21.65■■□□□ 1.06
TRIM47-205ENST00000587774 TMTC2Q8N394 836 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 PHOSPHO2Q8TCD6 241 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 CUL5Q93034 780 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 RTEL1Q9NZ71 1219 aa21.65■■□□□ 1.06
TRIM47-205ENST00000587774 BRWD1Q9NSI6 2320 aa21.64■■□□□ 1.06
TRIM47-205ENST00000587774 EVPLQ92817 2033 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 FIBPO43427 364 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 NBNO60934 754 aa21.64■■□□□ 1.05
TRIM47-205ENST00000587774 LGALS2P05162 132 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms