RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 GRIN2CQ14957 1233 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 SGMS1Q86VZ5 419 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 RASEFQ8IZ41 740 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 RETREG2Q8NC44 543 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 SMARCC2Q8TAQ2 1214 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 ZNF576Q9H609 170 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 RTEL1Q9NZ71 1219 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 HDAC6Q9UBN7 1215 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 FRMPD4Q14CM0 1322 aa24.56■■□□□ 1.52
CSNK1D-221ENST00000582844 DOCK5Q9H7D0 1870 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 PITPNM1O00562 1244 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 MEIS2O14770 477 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 PPFIA4O75335 1185 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 IQCF3P0C7M6 154 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 EXOSC10Q01780 885 aaKnown RBP24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 ADCK5Q3MIX3 580 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 C7orf31Q8N865 590 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 CUL5Q93034 780 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 CCDC136Q96JN2 1154 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 TCEANC2Q96MN5 208 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 MLXIPQ9HAP2 919 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 UNC80Q8N2C7 3258 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 TET1Q8NFU7 2136 aa24.55■■□□□ 1.52
CSNK1D-221ENST00000582844 TANC1Q9C0D5 1861 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 HAS3O00219 553 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 PIK3CDO00329 1044 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 F2P00734 622 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 HOXD8P13378 290 aaPredicted RBP24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 BFSP2Q13515 415 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 MFSD10Q14728 455 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 KIAA0753Q2KHM9 967 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 TSGA10IPQ3SY00 556 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 MICU3Q86XE3 530 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 GTF2IRD1Q9UHL9 959 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 SLC4A7Q9Y6M7 1214 aa24.54■■□□□ 1.52
CSNK1D-221ENST00000582844 ZBBXA8MT70 800 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 PFKMP08237 780 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 GNPTABQ3T906 1256 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 TMTC3Q6ZXV5 915 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 DHX32Q7L7V1 743 aaKnown RBP24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 INPP4AQ96PE3 977 aaPredicted RBP24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 KATNAL1Q9BW62 490 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 CHD9Q3L8U1 2897 aa24.53■■□□□ 1.52
CSNK1D-221ENST00000582844 SPATA31C2B4DYI2 1134 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 STAM2O75886 525 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 FOSL2P15408 326 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 ICAM3P32942 547 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 RFC2P35250 354 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 SEMA3FQ13275 785 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 SYNE3Q6ZMZ3 975 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 MAFAQ8NHW3 353 aaPredicted RBP24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 DHX38Q92620 1227 aaKnown RBP24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 PSTPIP2Q9H939 334 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 MSRAQ9UJ68 235 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 BRPF3Q9ULD4 1205 aa24.52■■□□□ 1.52
CSNK1D-221ENST00000582844 RABGGTBP53611 331 aa24.51■■□□□ 1.51
CSNK1D-221ENST00000582844 RAB30Q15771 203 aa24.51■■□□□ 1.51
CSNK1D-221ENST00000582844 PCNX4Q63HM2 1172 aa24.51■■□□□ 1.51
CSNK1D-221ENST00000582844 APOA5Q6Q788 366 aa24.51■■□□□ 1.51
CSNK1D-221ENST00000582844 C16orf70Q9BSU1 422 aa24.51■■□□□ 1.51
CSNK1D-221ENST00000582844 FTOQ9C0B1 505 aaKnown RBP eCLIP24.51■■□□□ 1.514e-6■■■■■ 39.9
CSNK1D-221ENST00000582844 PRUNE2Q8WUY3 3088 aa24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 ZNF200P98182 395 aaPredicted RBP24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 CCDC155Q8N6L0 562 aa24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 CAGE1Q8TC20 777 aa24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 NKX2-4Q9H2Z4 354 aa24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 YBX2Q9Y2T7 364 aaKnown RBP24.5■■□□□ 1.51
CSNK1D-221ENST00000582844 FIBPO43427 364 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 HIC1Q14526 733 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 KRT32Q14532 448 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 UBE2SQ16763 222 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 CYFIP1Q7L576 1253 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 AFAP1L1Q8TED9 768 aa24.49■■□□□ 1.51
CSNK1D-221ENST00000582844 DLL1O00548 723 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 ACTN1P12814 892 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 MYOGP15173 224 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 SELPP16109 830 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 ATP2A2P16615 1042 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 NEDD9Q14511 834 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 GPNMBQ14956 572 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 XRRA1Q6P2D8 792 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 HEATR3Q7Z4Q2 680 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 TELO2Q9Y4R8 837 aa24.48■■□□□ 1.51
CSNK1D-221ENST00000582844 H3BRB1 525 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 NOP56O00567 594 aaKnown RBP24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 ZBTB43O43298 467 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 CKBP12277 381 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 PTK7Q13308 1070 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 METTL7BQ6UX53 244 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 LRRC8DQ7L1W4 858 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.47■■□□□ 1.514e-6■■■□□ 14.8
CSNK1D-221ENST00000582844 WNT8BQ93098 351 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 PRDM12Q9H4Q4 367 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 TUT1Q9H6E5 874 aaKnown RBP24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 SLC28A3Q9HAS3 691 aa24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 RBM28Q9NW13 759 aaKnown RBP24.47■■□□□ 1.51
CSNK1D-221ENST00000582844 CNTNAP5Q8WYK1 1306 aa24.46■■□□□ 1.51
CSNK1D-221ENST00000582844 RBAK-RBAKDNI3L0D1 243 aa24.46■■□□□ 1.51
CSNK1D-221ENST00000582844 LGALS2P05162 132 aa24.46■■□□□ 1.51
CSNK1D-221ENST00000582844 CPA1P15085 419 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms