RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 FAM86B2P0C5J1 330 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 PDIA4P13667 645 aaKnown RBP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 U2AF2P26368 475 aaKnown RBP eCLIP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 GJA9P57773 515 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 NKX3-2P78367 333 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 SETQ01105 290 aaPredicted RBP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 LY6KQ17RY6 165 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 NOSTRINQ8IVI9 506 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 GIMAP8Q8ND71 665 aaPredicted RBP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 CYP2W1Q8TAV3 490 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 LENG1Q96BZ8 264 aaPredicted RBP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 SENP7Q9BQF6 1050 aa22.8■■□□□ 1.24
TOP3A-213ENST00000582230 UPF3AQ9H1J1 476 aaKnown RBP22.8■■□□□ 1.24
TOP3A-213ENST00000582230 CYP3A7-CYP3A51PA0A087WV96 503 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 POTEFA5A3E0 1075 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 DYNC1LI2O43237 492 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-213ENST00000582230 GCFC2P16383 781 aaKnown RBP22.79■■□□□ 1.24
TOP3A-213ENST00000582230 CYP3A7P24462 503 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 NEDD9Q14511 834 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 EARS2Q5JPH6 523 aaKnown RBP22.79■■□□□ 1.24
TOP3A-213ENST00000582230 TMEM63BQ5T3F8 832 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 RNF180Q86T96 592 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 PLA2G4DQ86XP0 818 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 ANKLE1Q8NAG6 615 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 KCNH7Q9NS40 1196 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 SYNRGQ9UMZ2 1314 aa22.79■■□□□ 1.24
TOP3A-213ENST00000582230 IGLV3-22A0A075B6J6 115 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 EDIL3O43854 480 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 ADAMTS4O75173 837 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 PGK1P00558 417 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 SYT1P21579 422 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 SP2Q02086 613 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 SEMA3FQ13275 785 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 LAMC2Q13753 1193 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 LETM2Q2VYF4 491 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 MCTP1Q6DN14 999 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 PPP4R3AQ6IN85 833 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 OR6J1Q8NGC5 347 aa22.78■■□□□ 1.24
TOP3A-213ENST00000582230 EMID1Q96A84 441 aaPredicted RBP22.78■■□□□ 1.24
TOP3A-213ENST00000582230 C6orf222P0C671 652 aaPredicted RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 UBA1P22314 1058 aaKnown RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 LRRC41Q15345 812 aa22.77■■□□□ 1.24
TOP3A-213ENST00000582230 PRR16Q569H4 304 aa22.77■■□□□ 1.24
TOP3A-213ENST00000582230 CELF3Q5SZQ8 465 aaKnown RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 GJC2Q5T442 439 aaPredicted RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 DHX37Q8IY37 1157 aaKnown RBP22.77■■□□□ 1.24
TOP3A-213ENST00000582230 COPS5Q92905 334 aa22.77■■□□□ 1.24
TOP3A-213ENST00000582230 MBOAT7Q96N66 472 aa22.77■■□□□ 1.24
TOP3A-213ENST00000582230 FAM205CA6NFA0 338 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 KIF28PB7ZC32 967 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 DNM1LO00429 736 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 GGPS1O95749 300 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 ARP10275 920 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 EN2P19622 333 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-213ENST00000582230 ARHGAP1Q07960 439 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 Q4G0T1 1027 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 BRDTQ58F21 947 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-213ENST00000582230 MYSM1Q5VVJ2 828 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 KLHDC9Q8NEP7 349 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 MLXIPQ9HAP2 919 aa22.76■■□□□ 1.23
TOP3A-213ENST00000582230 AGO4Q9HCK5 861 aaKnown RBP22.76■■□□□ 1.23
TOP3A-213ENST00000582230 VPS37CA5D8V6 355 aaPredicted RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 KBTBD13C9JR72 458 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 ZEB2O60315 1214 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 CCNT1O60563 726 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 TDP2O95551 362 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 MYCNP04198 464 aaPredicted RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 KCNA2P16389 499 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 TRAPPC10P48553 1259 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 CPT1AP50416 773 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 SOX10P56693 466 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 FSCN1Q16658 493 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 GNASQ5JWF2 1037 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 PCSK9Q8NBP7 692 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 SPRYD3Q8NCJ5 442 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 LENG9Q96B70 501 aa22.75■■□□□ 1.23
TOP3A-213ENST00000582230 TSEN34Q9BSV6 310 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 DDX25Q9UHL0 483 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 NOL7Q9UMY1 257 aaKnown RBP22.75■■□□□ 1.23
TOP3A-213ENST00000582230 A6NJR5 290 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 IPO5O00410 1097 aaKnown RBP22.74■■□□□ 1.23
TOP3A-213ENST00000582230 CTAGE5O15320 804 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 STX6O43752 255 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 ATP9AO75110 1047 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 PTGS1P23219 599 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 ANP32AP39687 249 aaKnown RBP22.74■■□□□ 1.23
TOP3A-213ENST00000582230 METTL7BQ6UX53 244 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 CYFIP1Q7L576 1253 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 SDF4Q9BRK5 362 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 ZNF577Q9BSK1 485 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 NFASCO94856 1347 aa22.74■■□□□ 1.23
TOP3A-213ENST00000582230 KPNA6O60684 536 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 CCSAPQ6IQ19 270 aaPredicted RBP22.73■■□□□ 1.23
TOP3A-213ENST00000582230 BRAPQ7Z569 592 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 PPTC7Q8NI37 304 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 AFG1LQ8WV93 481 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 SPATA33Q96N06 139 aa22.73■■□□□ 1.23
TOP3A-213ENST00000582230 TBC1D22BQ9NU19 505 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms