RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 RAB30Q15771 203 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 PTGISQ16647 500 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 CELF3Q5SZQ8 465 aaKnown RBP14.42□□□□□ -0.1
SENP3-204ENST00000580997 MAFAQ8NHW3 353 aaPredicted RBP14.42□□□□□ -0.1
SENP3-204ENST00000580997 RRP36Q96EU6 259 aaKnown RBP14.42□□□□□ -0.1
SENP3-204ENST00000580997 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 GTF2IRD1Q9UHL9 959 aa14.42□□□□□ -0.1
SENP3-204ENST00000580997 CCDC69A6NI79 296 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 CALM1P0DP23 149 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 CALM2P0DP24 149 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 CALM3P0DP25 149 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 FOSL2P15408 326 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 ICAM3P32942 547 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 GNAQP50148 359 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 MRPS9P82933 396 aaKnown RBP14.41□□□□□ -0.1
SENP3-204ENST00000580997 RBL2Q08999 1139 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 HSDL1Q3SXM5 330 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
SENP3-204ENST00000580997 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 FCHSD1Q86WN1 690 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.41□□□□□ -0.1
SENP3-204ENST00000580997 SRBD1Q8N5C6 995 aaKnown RBP14.41□□□□□ -0.1
SENP3-204ENST00000580997 RETREG2Q8NC44 543 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 CAGE1Q8TC20 777 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
SENP3-204ENST00000580997 KATNAL1Q9BW62 490 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 ANO2Q9NQ90 1003 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 MSRAQ9UJ68 235 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
SENP3-204ENST00000580997 SPATA31C2B4DYI2 1134 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 MEIS2O14770 477 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 PLEKHA8P1O95397 391 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 GGPS1O95749 300 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 UBA1P22314 1058 aaKnown RBP14.4□□□□□ -0.1
SENP3-204ENST00000580997 PSEN2P49810 448 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 GPNMBQ14956 572 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 TSGA10IPQ3SY00 556 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 XRRA1Q6P2D8 792 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 NFXL1Q6ZNB6 911 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 SKAP1Q86WV1 359 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 AFAP1L1Q8TED9 768 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 GPKOWQ92917 476 aaPredicted RBP eCLIP14.4□□□□□ -0.1
SENP3-204ENST00000580997 SPATA33Q96N06 139 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 C16orf70Q9BSU1 422 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 NOD1Q9Y239 953 aa14.4□□□□□ -0.1
SENP3-204ENST00000580997 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 CHMP4BP1P59074 171 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 EXOSC10Q01780 885 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 MFSD10Q14728 455 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 PCNX4Q63HM2 1172 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 USP17L6PQ6QN14 398 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 FANCBQ8NB91 859 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 PHOSPHO2Q8TCD6 241 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 DHX38Q92620 1227 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 ZFP91Q96JP5 570 aaPredicted RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 BCAS3Q9H6U6 928 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 YBX2Q9Y2T7 364 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
SENP3-204ENST00000580997 BAZ2BQ9UIF8 2168 aaKnown RBP14.39□□□□□ -0.11
SENP3-204ENST00000580997 PARNO95453 639 aaKnown RBP14.38□□□□□ -0.11
SENP3-204ENST00000580997 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 ACTN1P12814 892 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 SELPP16109 830 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 CMTR1Q8N1G2 835 aaKnown RBP14.38□□□□□ -0.11
SENP3-204ENST00000580997 MLXIPQ9HAP2 919 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 SLC28A3Q9HAS3 691 aa14.38□□□□□ -0.11
SENP3-204ENST00000580997 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 FIBPO43427 364 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 BAIAP3O94812 1187 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 CXCL10P02778 98 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 CKBP12277 381 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 RXRAP19793 462 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 HOXC8P31273 242 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 RABGGTBP53611 331 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 SEMA3FQ13275 785 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 PTK7Q13308 1070 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 NEDD9Q14511 834 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 HIC1Q14526 733 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
SENP3-204ENST00000580997 METTL7BQ6UX53 244 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 CUL5Q93034 780 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 NEK1Q96PY6 1258 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 USP26Q9BXU7 913 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 LRRC2Q9BYS8 371 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 NKX2-4Q9H2Z4 354 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 PSTPIP2Q9H939 334 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms