RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 MYSM1Q5VVJ2 828 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 AFAP1L1Q8TED9 768 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 DHX38Q92620 1227 aaKnown RBP24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 GPKOWQ92917 476 aaPredicted RBP eCLIP24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 SPZ1Q9BXG8 430 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 SEC63Q9UGP8 760 aaKnown RBP24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 GBF1Q92538 1859 aa24.42■■□□□ 1.5
CHRNB1-206ENST00000574054 TANC1Q9C0D5 1861 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 CCDC69A6NI79 296 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 SLC27A2O14975 620 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 TGFB3P10600 412 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 SP2Q02086 613 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 HSDL1Q3SXM5 330 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 MAP3K14Q99558 947 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 MLXIPQ9HAP2 919 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 ANO2Q9NQ90 1003 aa24.41■■□□□ 1.5
CHRNB1-206ENST00000574054 MYH7BA7E2Y1 1941 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 SH2B2O14492 632 aaPredicted RBP24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 PPFIA4O75335 1185 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 SELPP16109 830 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 ADGRE1Q14246 886 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 CREB3L3Q68CJ9 461 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 LRRC8DQ7L1W4 858 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 CUL5Q93034 780 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 TMEM87BQ96K49 555 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 SLC9A7Q96T83 725 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 LZTS2Q9BRK4 669 aa24.4■■□□□ 1.5
CHRNB1-206ENST00000574054 TTC28Q96AY4 2481 aa24.39■■□□□ 1.5
CHRNB1-206ENST00000574054 HAS3O00219 553 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 PLEKHA8P1O95397 391 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 HOXD8P13378 290 aaPredicted RBP24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 GNAQP50148 359 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 GNPTABQ3T906 1256 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 TMTC2Q8N394 836 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 SMARCC2Q8TAQ2 1214 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 MTA3Q9BTC8 594 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 TRANK1O15050 2925 aa24.39■■□□□ 1.49
CHRNB1-206ENST00000574054 TRIP12Q14669 1992 aaPredicted RBP24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 CA3P07451 260 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 CKBP12277 381 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 RXRAP19793 462 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 KCNJ6P48051 423 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 ZNF200P98182 395 aaPredicted RBP24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 COL9A3Q14050 684 aaPredicted RBP24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 CCDC85BQ15834 202 aaPredicted RBP24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 RAB11FIP4Q86YS3 637 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 LRRC2Q9BYS8 371 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 RTEL1Q9NZ71 1219 aa24.38■■□□□ 1.49
CHRNB1-206ENST00000574054 FRMPD4Q14CM0 1322 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 TET1Q8NFU7 2136 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 NOP56O00567 594 aaKnown RBP24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 MRPS9P82933 396 aaKnown RBP24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 PTK7Q13308 1070 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 USP17L6PQ6QN14 398 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 CMTR1Q8N1G2 835 aaKnown RBP24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 SRBD1Q8N5C6 995 aaKnown RBP24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 PHOSPHO2Q8TCD6 241 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 BCAS3Q9H6U6 928 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 PRDM6Q9NQX0 595 aa24.37■■□□□ 1.49
CHRNB1-206ENST00000574054 STAM2O75886 525 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 BAIAP3O94812 1187 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 CALM1P0DP23 149 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 CALM2P0DP24 149 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 CALM3P0DP25 149 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 RBL2Q08999 1139 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 HERC6Q8IVU3 1022 aa24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 INPP4AQ96PE3 977 aaPredicted RBP24.36■■□□□ 1.49
CHRNB1-206ENST00000574054 KIF28PB7ZC32 967 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 PARNO95453 639 aaKnown RBP24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 SMARCA1P28370 1054 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 LIFRP42702 1097 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 GPNMBQ14956 572 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 NECTIN1Q15223 517 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 CYFIP1Q7L576 1253 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 MICALL1Q8N3F8 863 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 WNT8BQ93098 351 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 C16orf70Q9BSU1 422 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 CERS4Q9HA82 394 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 SLC12A7Q9Y666 1083 aa24.35■■□□□ 1.49
CHRNB1-206ENST00000574054 FIBPO43427 364 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 NBNO60934 754 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 LGALS2P05162 132 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 SEMA3FQ13275 785 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 NEDD9Q14511 834 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 TRIM71Q2Q1W2 868 aaKnown RBP24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 BMP2KLQ5H9B9 411 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 CENPQQ7L2Z9 268 aaPredicted RBP24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 CCDC82Q8N4S0 544 aa24.34■■□□□ 1.49
CHRNB1-206ENST00000574054 SPTBN5Q9NRC6 3674 aaKnown RBP24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 hCG_1642624A0A1W2PR95 340 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 C17orf102A2RUQ5 167 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 SPATA31C2B4DYI2 1134 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 H3BRB1 525 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 PIK3CDO00329 1044 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 MEIS2O14770 477 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 ICAM3P32942 547 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 WDR5P61964 334 aaKnown RBP24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 HIC1Q14526 733 aa24.33■■□□□ 1.49
CHRNB1-206ENST00000574054 ZNF618Q5T7W0 954 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms