RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
RPAIN-214ENST00000574003 LZTS2Q9BRK4 669 aa13.06□□□□□ -0.32
RPAIN-214ENST00000574003 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
RPAIN-214ENST00000574003 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-214ENST00000574003 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
RPAIN-214ENST00000574003 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
RPAIN-214ENST00000574003 GBF1Q92538 1859 aa13.06□□□□□ -0.32
RPAIN-214ENST00000574003 SUPT20HL2P0C7V6 817 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 MYOGP15173 224 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 CDC27P30260 824 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SP4Q02446 784 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 TRAF1Q13077 416 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 MFSD10Q14728 455 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 GRIN2CQ14957 1233 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 HEATR3Q7Z4Q2 680 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 CUL5Q93034 780 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 WNT8BQ93098 351 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-214ENST00000574003 PGBD1Q96JS3 809 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SEZ6LQ9BYH1 1024 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 FAM217BQ9NTX9 383 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-214ENST00000574003 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
RPAIN-214ENST00000574003 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 GOLGA8AA7E2F4 631 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 GOLGA8BA8MQT2 603 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 ZBBXA8MT70 800 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 CALM1P0DP23 149 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 CALM2P0DP24 149 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 CALM3P0DP25 149 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 FUT2Q10981 343 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 RTN1Q16799 776 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 CYFIP1Q7L576 1253 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 TIFAQ96CG3 184 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
RPAIN-214ENST00000574003 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
RPAIN-214ENST00000574003 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
RPAIN-214ENST00000574003 SPATA31C2B4DYI2 1134 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 HAS3O00219 553 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 PIK3CDO00329 1044 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 ZBTB43O43298 467 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 ATP9AO75110 1047 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 PPFIA3O75145 1194 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 F2P00734 622 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 HOXD8P13378 290 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-214ENST00000574003 HSPA4P34932 840 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-214ENST00000574003 GPNMBQ14956 572 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
RPAIN-214ENST00000574003 Q6ZUG5 572 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 TRIM50Q86XT4 487 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 KCNB2Q92953 911 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 INPP4AQ96PE3 977 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-214ENST00000574003 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 NKX2-4Q9H2Z4 354 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
RPAIN-214ENST00000574003 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-214ENST00000574003 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
RPAIN-214ENST00000574003 PPFIA4O75335 1185 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 LGALS2P05162 132 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 ICAM3P32942 547 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
RPAIN-214ENST00000574003 GNPTABQ3T906 1256 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 PCNX4Q63HM2 1172 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 KCNV1Q6PIU1 500 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 RPUSD2Q8IZ73 545 aaKnown RBP13.02□□□□□ -0.33
RPAIN-214ENST00000574003 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPAIN-214ENST00000574003 TMEM260Q9NX78 707 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 EYSQ5T1H1 3165 aa13.02□□□□□ -0.33
RPAIN-214ENST00000574003 FIBPO43427 364 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 NEFLP07196 543 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 TGFB3P10600 412 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 ITGB5P18084 799 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 NAPAP54920 295 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 BFSP2Q13515 415 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 KRT32Q14532 448 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 TRIM71Q2Q1W2 868 aaKnown RBP13.01□□□□□ -0.33
RPAIN-214ENST00000574003 TMCO2Q7Z6W1 182 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-214ENST00000574003 BRF1Q92994 677 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms