RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 RNF169Q8NCN4 708 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMG6-213ENST00000573166 PFASO15067 1338 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 MANSC4A6NHS7 340 aaPredicted RBP11.2□□□□□ -0.62
SMG6-213ENST00000573166 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 AKR1B10O60218 316 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 PLA2G4BP0C869 781 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 LIG4P49917 911 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 PRELPP51888 382 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 INO80BQ9C086 356 aaPredicted RBP11.2□□□□□ -0.62
SMG6-213ENST00000573166 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■□□□ 13.9
SMG6-213ENST00000573166 ARID5AQ03989 594 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 MTERF4Q7Z6M4 381 aaKnown RBP11.2□□□□□ -0.62
SMG6-213ENST00000573166 MNS1Q8NEH6 495 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 CLMNQ96JQ2 1002 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 H0YCG3 227 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 CYP2J2P51589 502 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
SMG6-213ENST00000573166 PPP2R5AQ15172 486 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
SMG6-213ENST00000573166 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 ERLIN2O94905 339 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 MYL3P08590 195 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 YBX3P16989 372 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMG6-213ENST00000573166 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 SPATA33Q96N06 139 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 ADPGKQ9BRR6 497 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 C10orf71Q711Q0 1435 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 SWSAP1Q6NVH7 229 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 ANKS1AQ92625 1134 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 GSDMAQ96QA5 445 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 EGFRP00533 1210 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 DSG3P32926 999 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 PTGER2P43116 358 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 LONRF3Q496Y0 759 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 GJA10Q969M2 543 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 DRC1Q96MC2 740 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 FAM49AQ9H0Q0 323 aaPredicted RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 CBX8Q9HC52 389 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMG6-213ENST00000573166 NUP98P52948 1817 aa11.19□□□□□ -0.62
SMG6-213ENST00000573166 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
SMG6-213ENST00000573166 PP2D1A8MPX8 630 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 CYP2C8P10632 490 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 KCNA3P22001 575 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 TFDP1Q14186 410 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 DPH6Q7L8W6 267 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 GOLGA6L1Q8N7Z2 621 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 ABCA3Q99758 1704 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 POTEB3A0JP26 581 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 POTECB2RU33 542 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 HNRNPDLO14979 420 aaKnown RBP11.18□□□□□ -0.62
SMG6-213ENST00000573166 GGPS1O95749 300 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 SFNP31947 248 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 EVCP57679 992 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 PPIL2Q13356 520 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 TRPC3Q13507 836 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 NTRK3Q16288 839 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 POTEBQ6S5H4 581 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 PAF1Q8N7H5 531 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 DYDC2Q96IM9 177 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 NFIBO00712 420 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 QARSP47897 775 aaKnown RBP11.18□□□□□ -0.62
SMG6-213ENST00000573166 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
SMG6-213ENST00000573166 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 TATDN1Q6P1N9 297 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 MKL1Q969V6 931 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 TIGD1Q96MW7 591 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 MROH8Q9H579 483 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 PCDHA10Q9Y5I2 948 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
SMG6-213ENST00000573166 VWA5AO00534 786 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 PGK2P07205 417 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 P4HBP07237 508 aaKnown RBP11.17□□□□□ -0.62
SMG6-213ENST00000573166 FKBP1BP68106 108 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
SMG6-213ENST00000573166 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms