RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 POLR2MP0CAP2 368 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 RXRAP19793 462 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 MFSD10Q14728 455 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 DGKDQ16760 1214 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 CELF3Q5SZQ8 465 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 LRRC2Q9BYS8 371 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
GTF3C1-211ENST00000569653 SIP14410 1827 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 EPOPA6NHQ4 379 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 NBNO60934 754 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 PFKMP08237 780 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 CASTP20810 708 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 RBL2Q08999 1139 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 LAMC2Q13753 1193 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 NECTIN1Q15223 517 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 KIAA0753Q2KHM9 967 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 CATIPQ7Z7H3 387 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 DHX37Q8IY37 1157 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 C16orf70Q9BSU1 422 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 MTIF3Q9H2K0 278 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
GTF3C1-211ENST00000569653 ERICH2A1L162 156 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 RFXAPO00287 272 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 MEIS2O14770 477 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 DDAH1O94760 285 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 RFC2P35250 354 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 BFSP2Q13515 415 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 USP17L6PQ6QN14 398 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
GTF3C1-211ENST00000569653 NCOR1O75376 2440 aa16.02■□□□□ 0.15
GTF3C1-211ENST00000569653 hCG_1642624A0A1W2PR95 340 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 CA3P07451 260 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 CKBP12277 381 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 CCND2P30279 289 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 LRRC8DQ7L1W4 858 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 RETREG2Q8NC44 543 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 PPM1EQ8WY54 764 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 SPATA33Q96N06 139 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 INPP4AQ96PE3 977 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 SLC28A3Q9HAS3 691 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 NOD1Q9Y239 953 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 BRWD1Q9NSI6 2320 aa16.01■□□□□ 0.15
GTF3C1-211ENST00000569653 BDP1A6H8Y1 2624 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 LCHNA4D1U4 455 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 CXCL10P02778 98 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 SELPP16109 830 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 HOXC8P31273 242 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 DEFB103AP81534 67 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 PPP2R2DQ66LE6 453 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 HERC6Q8IVU3 1022 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 CAGE1Q8TC20 777 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
GTF3C1-211ENST00000569653 RTEL1Q9NZ71 1219 aa16■□□□□ 0.15
GTF3C1-211ENST00000569653 TCF20Q9UGU0 1960 aaKnown RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 PPFIA4O75335 1185 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 LGALS2P05162 132 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 ICAM3P32942 547 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 MCM5P33992 734 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 WDR5P61964 334 aaKnown RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 TAP1Q03518 808 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 CCDC85BQ15834 202 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 ZNF618Q5T7W0 954 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 KRT40Q6A162 431 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 C7orf31Q8N865 590 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 SLC9A7Q96T83 725 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 GAS2L1Q99501 681 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 MTA3Q9BTC8 594 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 KAT6AQ92794 2004 aa15.99■□□□□ 0.15
GTF3C1-211ENST00000569653 PIK3CDO00329 1044 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 TGFB3P10600 412 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 LIFRP42702 1097 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 PTK7Q13308 1070 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 BMP2KLQ5H9B9 411 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 TYW1BQ6NUM6 668 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 SERINC5Q86VE9 423 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms