RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PPM1EQ8WY54 764 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 CTAGE1Q96RT6 745 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 SPZ1Q9BXG8 430 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 MTIF3Q9H2K0 278 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 TELO2Q9Y4R8 837 aa14.11□□□□□ -0.15
GTF3C1-208ENST00000567843 TMEM265A0A087WTH1 108 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 BFSP2Q13515 415 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 HIC1Q14526 733 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 TMTC2Q8N394 836 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 SAMD3Q8N6K7 520 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 NEK1Q96PY6 1258 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
GTF3C1-208ENST00000567843 SCN5AQ14524 2016 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 MEIS2O14770 477 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 CDC45O75419 566 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 CPA1P15085 419 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 LIFRP42702 1097 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 GNAQP50148 359 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 SEMA3FQ13275 785 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 UBE2SQ16763 222 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 TMTC3Q6ZXV5 915 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 CYFIP1Q7L576 1253 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 FANCBQ8NB91 859 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 CUL5Q93034 780 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 WNT8BQ93098 351 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 PKD2L1Q9P0L9 805 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 GTF2IRD1Q9UHL9 959 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 BRPF3Q9ULD4 1205 aa14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
GTF3C1-208ENST00000567843 KIAA1217Q5T5P2 1943 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 HAS3O00219 553 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 PPFIA4O75335 1185 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 F2P00734 622 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 CALM1P0DP23 149 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 CALM2P0DP24 149 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 CALM3P0DP25 149 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 RAB30Q15771 203 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 UTP14CQ5TAP6 766 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 RNF20Q5VTR2 975 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 KCNV1Q6PIU1 500 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 HEATR3Q7Z4Q2 680 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 SESTD1Q86VW0 696 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 MTA3Q9BTC8 594 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 PSTPIP2Q9H939 334 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 CERS4Q9HA82 394 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
GTF3C1-208ENST00000567843 SPATA31C2B4DYI2 1134 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 ACTN1P12814 892 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 IGFBP4P22692 258 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 SMARCA1P28370 1054 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 EXOSC10Q01780 885 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 ADGRE1Q14246 886 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 GPNMBQ14956 572 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 CCDC85BQ15834 202 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 TCTN1Q2MV58 587 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 SYNE3Q6ZMZ3 975 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 CCDC155Q8N6L0 562 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 TET1Q8NFU7 2136 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 INPP4AQ96PE3 977 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 GAS2L1Q99501 681 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 KATNAL1Q9BW62 490 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 PRDM6Q9NQX0 595 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 UNC80Q8N2C7 3258 aa14.07□□□□□ -0.16
GTF3C1-208ENST00000567843 TRIP12Q14669 1992 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 FIBPO43427 364 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 LGALS2P05162 132 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 PFKMP08237 780 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 TGFB3P10600 412 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 CKBP12277 381 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 HOXD8P13378 290 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 SELPP16109 830 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 RFC2P35250 354 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 DHX32Q7L7V1 743 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 AFAP1L1Q8TED9 768 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 PGBD1Q96JS3 809 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 EYSQ5T1H1 3165 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 FRMPD4Q14CM0 1322 aa14.06□□□□□ -0.16
GTF3C1-208ENST00000567843 PRUNE2Q8WUY3 3088 aa14.05□□□□□ -0.16
GTF3C1-208ENST00000567843 KLF18A0A0U1RQI7 1052 aa14.05□□□□□ -0.16
GTF3C1-208ENST00000567843 H3BRB1 525 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms