RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 POLR2MP0CAP2 368 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 CELF3Q5SZQ8 465 aaKnown RBP17.71■□□□□ 0.43
CDR2-206ENST00000567406 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 KRT40Q6A162 431 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 SESTD1Q86VW0 696 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 EMID1Q96A84 441 aaPredicted RBP17.71■□□□□ 0.43
CDR2-206ENST00000567406 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
CDR2-206ENST00000567406 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
CDR2-206ENST00000567406 PNMA6FA0A0J9YX94 578 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 NBNO60934 754 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 CKBP12277 381 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 SELPP16109 830 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
CDR2-206ENST00000567406 TJAP1Q5JTD0 557 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 SKAP1Q86WV1 359 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 HERC6Q8IVU3 1022 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 MB21D2Q8IYB1 491 aaPredicted RBP17.7■□□□□ 0.42
CDR2-206ENST00000567406 MAP4K1Q92918 833 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
CDR2-206ENST00000567406 HAS3O00219 553 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 F2P00734 622 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 CCND2P30279 289 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 DEFB103AP81534 67 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 RAB11FIP4Q86YS3 637 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 CCDC155Q8N6L0 562 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 CAGE1Q8TC20 777 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 AFAP1L1Q8TED9 768 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 ARNTL2Q8WYA1 636 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 SLC9A7Q96T83 725 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 TELO2Q9Y4R8 837 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 PRRC2BQ5JSZ5 2229 aaKnown RBP17.69■□□□□ 0.42
CDR2-206ENST00000567406 TRANK1O15050 2925 aa17.69■□□□□ 0.42
CDR2-206ENST00000567406 PTPRSQ13332 1948 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 LCHNA4D1U4 455 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 RXRAP19793 462 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 WDR5P61964 334 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 TAP1Q03518 808 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 SART3Q15020 963 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 TRIM71Q2Q1W2 868 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 ZNF618Q5T7W0 954 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 MLXIPQ9HAP2 919 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 LY9Q9HBG7 655 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 MAP3K20Q9NYL2 800 aaKnown RBP17.68■□□□□ 0.42
CDR2-206ENST00000567406 THEGQ9P2T0 379 aa17.68■□□□□ 0.42
CDR2-206ENST00000567406 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 TRAF7Q6Q0C0 670 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 USP17L6PQ6QN14 398 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 PHOSPHO2Q8TCD6 241 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 ASB2Q96Q27 587 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 C16orf70Q9BSU1 422 aa17.67■□□□□ 0.42
CDR2-206ENST00000567406 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 PRC1O43663 620 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 TLL1O43897 1013 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 HOXD8P13378 290 aaPredicted RBP17.66■□□□□ 0.42
CDR2-206ENST00000567406 KCNJ6P48051 423 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 TFF2Q03403 129 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 PTK7Q13308 1070 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 MBTPS1Q14703 1052 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 FAM117BQ6P1L5 589 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 KCNV1Q6PIU1 500 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 CYFIP1Q7L576 1253 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 SAMD3Q8N6K7 520 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 ATXN2LQ8WWM7 1075 aaKnown RBP17.66■□□□□ 0.42
CDR2-206ENST00000567406 LRRC2Q9BYS8 371 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 DOCK5Q9H7D0 1870 aa17.66■□□□□ 0.42
CDR2-206ENST00000567406 KIF28PB7ZC32 967 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 BAIAP3O94812 1187 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 CXCL10P02778 98 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 SP4Q02446 784 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
CDR2-206ENST00000567406 CNKSR3Q6P9H4 555 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
CDR2-206ENST00000567406 ZBED2Q9BTP6 218 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 OSBPL7Q9BZF2 842 aa17.65■□□□□ 0.42
CDR2-206ENST00000567406 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
CDR2-206ENST00000567406 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
CDR2-206ENST00000567406 SLC27A2O14975 620 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 LGALS2P05162 132 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 TGFB3P10600 412 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 THPOP40225 353 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
CDR2-206ENST00000567406 RBL2Q08999 1139 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 TRAF1Q13077 416 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 TRIM50Q86XT4 487 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 CTCFLQ8NI51 663 aaPredicted RBP17.64■□□□□ 0.41
CDR2-206ENST00000567406 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
CDR2-206ENST00000567406 RRP36Q96EU6 259 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms