RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PFKMP08237 780 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 ATP2A2P16615 1042 aaKnown RBP27.48■■□□□ 1.99
RAB40C-209ENST00000565511 CCND2P30279 289 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 MRPS9P82933 396 aaKnown RBP27.48■■□□□ 1.99
RAB40C-209ENST00000565511 ZNF200P98182 395 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-209ENST00000565511 SEMA3FQ13275 785 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 MFSD10Q14728 455 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 TCTN1Q2MV58 587 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 CREB3L3Q68CJ9 461 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 CMTR1Q8N1G2 835 aaKnown RBP27.48■■□□□ 1.99
RAB40C-209ENST00000565511 SAMD3Q8N6K7 520 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 SPZ1Q9BXG8 430 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 LRRC2Q9BYS8 371 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 TELO2Q9Y4R8 837 aa27.48■■□□□ 1.99
RAB40C-209ENST00000565511 ARHGEF15O94989 841 aa27.47■■□□□ 1.99
RAB40C-209ENST00000565511 KIAA0753Q2KHM9 967 aa27.47■■□□□ 1.99
RAB40C-209ENST00000565511 SRBD1Q8N5C6 995 aaKnown RBP27.47■■□□□ 1.99
RAB40C-209ENST00000565511 RETREG2Q8NC44 543 aa27.47■■□□□ 1.99
RAB40C-209ENST00000565511 RFC2P35250 354 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 BFSP2Q13515 415 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 NECTIN1Q15223 517 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 SPATA33Q96N06 139 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 MAP3K14Q99558 947 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 TTC28Q96AY4 2481 aa27.46■■□□□ 1.99
RAB40C-209ENST00000565511 TRIM71Q2Q1W2 868 aaKnown RBP27.45■■□□□ 1.98
RAB40C-209ENST00000565511 TRAF7Q6Q0C0 670 aa27.45■■□□□ 1.98
RAB40C-209ENST00000565511 USP17L6PQ6QN14 398 aa27.45■■□□□ 1.98
RAB40C-209ENST00000565511 CASC1Q6TDU7 716 aa27.45■■□□□ 1.98
RAB40C-209ENST00000565511 CTCFLQ8NI51 663 aaPredicted RBP27.45■■□□□ 1.98
RAB40C-209ENST00000565511 PCDHA11Q9Y5I1 949 aa27.45■■□□□ 1.98
RAB40C-209ENST00000565511 MCM5P33992 734 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 RBL2Q08999 1139 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 CAGE1Q8TC20 777 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 AFAP1L1Q8TED9 768 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 C16orf70Q9BSU1 422 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 FTOQ9C0B1 505 aaKnown RBP eCLIP27.44■■□□□ 1.98
RAB40C-209ENST00000565511 SLC28A3Q9HAS3 691 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 ANO2Q9NQ90 1003 aa27.44■■□□□ 1.98
RAB40C-209ENST00000565511 hCG_1642624A0A1W2PR95 340 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 MEIS2O14770 477 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 NBNO60934 754 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 TRAF1Q13077 416 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 LRRC8DQ7L1W4 858 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 C7orf31Q8N865 590 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 PPM1EQ8WY54 764 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 RRP36Q96EU6 259 aaKnown RBP27.43■■□□□ 1.98
RAB40C-209ENST00000565511 INPP4AQ96PE3 977 aaPredicted RBP27.43■■□□□ 1.98
RAB40C-209ENST00000565511 GAS2L1Q99501 681 aaPredicted RBP27.43■■□□□ 1.98
RAB40C-209ENST00000565511 MTA3Q9BTC8 594 aa27.43■■□□□ 1.98
RAB40C-209ENST00000565511 CKBP12277 381 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 SELPP16109 830 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 PPP2R2DQ66LE6 453 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 KCNV1Q6PIU1 500 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 NFXL1Q6ZNB6 911 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 SPRED2Q7Z698 418 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 TMCO2Q7Z6W1 182 aaPredicted RBP27.42■■□□□ 1.98
RAB40C-209ENST00000565511 TMEM87BQ96K49 555 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 KATNAL1Q9BW62 490 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 RTEL1Q9NZ71 1219 aa27.42■■□□□ 1.98
RAB40C-209ENST00000565511 REV3LO60673 3130 aa27.41■■□□□ 1.98
RAB40C-209ENST00000565511 CA3P07451 260 aa27.41■■□□□ 1.98
RAB40C-209ENST00000565511 MBTPS1Q14703 1052 aa27.41■■□□□ 1.98
RAB40C-209ENST00000565511 BMP2KLQ5H9B9 411 aa27.41■■□□□ 1.98
RAB40C-209ENST00000565511 TRANK1O15050 2925 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 EPOPA6NHQ4 379 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 CCDC69A6NI79 296 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 PPFIA4O75335 1185 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 TGFB3P10600 412 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 ACTN1P12814 892 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 ICAM3P32942 547 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 KIF5BP33176 963 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 LIFRP42702 1097 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 CCDC155Q8N6L0 562 aa27.4■■□□□ 1.98
RAB40C-209ENST00000565511 COL4A4P53420 1690 aaPredicted RBP27.4■■□□□ 1.98
RAB40C-209ENST00000565511 SPATA31C2B4DYI2 1134 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 RFXAPO00287 272 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 LGALS2P05162 132 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 SMARCA1P28370 1054 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 PTK7Q13308 1070 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 ZNF618Q5T7W0 954 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 TRIM50Q86XT4 487 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 HERC6Q8IVU3 1022 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 TCEANC2Q96MN5 208 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 SLC9A7Q96T83 725 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 CERS4Q9HA82 394 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 MLXIPQ9HAP2 919 aa27.39■■□□□ 1.98
RAB40C-209ENST00000565511 PRRC2BQ5JSZ5 2229 aaKnown RBP27.39■■□□□ 1.97
RAB40C-209ENST00000565511 PIK3CDO00329 1044 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 CXCL10P02778 98 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 IGFBP4P22692 258 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 WDR5P61964 334 aaKnown RBP27.38■■□□□ 1.97
RAB40C-209ENST00000565511 DEFB103AP81534 67 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 CCDC85BQ15834 202 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-209ENST00000565511 TMTC3Q6ZXV5 915 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 CYFIP1Q7L576 1253 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 SMARCC2Q8TAQ2 1214 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 LZTS2Q9BRK4 669 aa27.38■■□□□ 1.97
RAB40C-209ENST00000565511 HOXC8P31273 242 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 UBE2SQ16763 222 aa27.37■■□□□ 1.97
RAB40C-209ENST00000565511 CENPQQ7L2Z9 268 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms