RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 GTF2IRD1Q9UHL9 959 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 NOD1Q9Y239 953 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
CMTM3-209ENST00000565003 RBAK-RBAKDNI3L0D1 243 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 PIK3CDO00329 1044 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 PFKMP08237 780 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 TGFB3P10600 412 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 PSEN2P49810 448 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 MFSD10Q14728 455 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 KCNV1Q6PIU1 500 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 APOA5Q6Q788 366 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 TMTC3Q6ZXV5 915 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 RPUSD2Q8IZ73 545 aaKnown RBP11.57□□□□□ -0.56
CMTM3-209ENST00000565003 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 FANCBQ8NB91 859 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 SMARCC2Q8TAQ2 1214 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 DHX38Q92620 1227 aaKnown RBP11.57□□□□□ -0.56
CMTM3-209ENST00000565003 SPATA33Q96N06 139 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 INPP4AQ96PE3 977 aaPredicted RBP11.57□□□□□ -0.56
CMTM3-209ENST00000565003 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 ALG1Q9BT22 464 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 KATNAL1Q9BW62 490 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 MTIF3Q9H2K0 278 aaKnown RBP11.57□□□□□ -0.56
CMTM3-209ENST00000565003 ZNF576Q9H609 170 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 HDAC6Q9UBN7 1215 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 BRPF3Q9ULD4 1205 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 GBF1Q92538 1859 aa11.57□□□□□ -0.56
CMTM3-209ENST00000565003 ZBBXA8MT70 800 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 FOSL2P15408 326 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 ICAM3P32942 547 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 EXOSC10Q01780 885 aaKnown RBP11.56□□□□□ -0.56
CMTM3-209ENST00000565003 HIC1Q14526 733 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 GNPTABQ3T906 1256 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 DHX32Q7L7V1 743 aaKnown RBP11.56□□□□□ -0.56
CMTM3-209ENST00000565003 RETREG2Q8NC44 543 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 MAFAQ8NHW3 353 aaPredicted RBP11.56□□□□□ -0.56
CMTM3-209ENST00000565003 CUL5Q93034 780 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 C16orf70Q9BSU1 422 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 RTEL1Q9NZ71 1219 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 YBX2Q9Y2T7 364 aaKnown RBP11.56□□□□□ -0.56
CMTM3-209ENST00000565003 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 CNTNAP5Q8WYK1 1306 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 TET1Q8NFU7 2136 aa11.56□□□□□ -0.56
CMTM3-209ENST00000565003 DOCK5Q9H7D0 1870 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 SPATA31C2B4DYI2 1134 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 FIBPO43427 364 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 STAM2O75886 525 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 RFC2P35250 354 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 RABGGTBP53611 331 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 ZNF200P98182 395 aaPredicted RBP11.55□□□□□ -0.56
CMTM3-209ENST00000565003 RBL2Q08999 1139 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 BFSP2Q13515 415 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 GPNMBQ14956 572 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 RAB30Q15771 203 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 UBE2SQ16763 222 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 PCNX4Q63HM2 1172 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 WNT8BQ93098 351 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 NKX2-4Q9H2Z4 354 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 SLC4A7Q9Y6M7 1214 aa11.55□□□□□ -0.56
CMTM3-209ENST00000565003 TRIP12Q14669 1992 aaPredicted RBP11.55□□□□□ -0.56
CMTM3-209ENST00000565003 LGALS2P05162 132 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 CPA1P15085 419 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 MYOGP15173 224 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 SELPP16109 830 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
CMTM3-209ENST00000565003 FUT2Q10981 343 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 TRIM71Q2Q1W2 868 aaKnown RBP11.54□□□□□ -0.56
CMTM3-209ENST00000565003 WWC2Q6AWC2 1192 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 METTL7BQ6UX53 244 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 LRRC8DQ7L1W4 858 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 CYFIP1Q7L576 1253 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 HEATR3Q7Z4Q2 680 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
CMTM3-209ENST00000565003 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 FAM217BQ9NTX9 383 aaPredicted RBP11.54□□□□□ -0.56
CMTM3-209ENST00000565003 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
CMTM3-209ENST00000565003 MSRAQ9UJ68 235 aa11.54□□□□□ -0.56
CMTM3-209ENST00000565003 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 H3BRB1 525 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
CMTM3-209ENST00000565003 ZBTB43O43298 467 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 NBNO60934 754 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 CKBP12277 381 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 ITGB5P18084 799 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 CDC27P30260 824 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 HSPA4P34932 840 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 PTK7Q13308 1070 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 NEDD9Q14511 834 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms