RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PNMA6FA0A0J9YX94 578 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 F2P00734 622 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 SP2Q02086 613 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 HSDL1Q3SXM5 330 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 VSIG10LQ86VR7 867 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 KATNAL1Q9BW62 490 aa31.32■■■□□ 2.6
SNRPA1-215ENST00000561187 SELPP16109 830 aa31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 TJAP1Q5JTD0 557 aa31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 CELF3Q5SZQ8 465 aaKnown RBP31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 MYSM1Q5VVJ2 828 aa31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 WNT8BQ93098 351 aa31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 THEGQ9P2T0 379 aa31.31■■■□□ 2.6
SNRPA1-215ENST00000561187 PTPRSQ13332 1948 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 KCNJ6P48051 423 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 GPNMBQ14956 572 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 RAB11FIP4Q86YS3 637 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 HERC6Q8IVU3 1022 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 IGDCC4Q8TDY8 1250 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 MAP4K1Q92918 833 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 BCAS3Q9H6U6 928 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 MAP3K20Q9NYL2 800 aaKnown RBP31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 REV3LO60673 3130 aa31.3■■■□□ 2.6
SNRPA1-215ENST00000561187 EPOPA6NHQ4 379 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 CKBP12277 381 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 COL9A3Q14050 684 aaPredicted RBP31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 SPRED2Q7Z698 418 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 ZNF654Q8IZM8 581 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 MLXIPQ9HAP2 919 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 LY9Q9HBG7 655 aa31.29■■■□□ 2.6
SNRPA1-215ENST00000561187 HAS3O00219 553 aa31.28■■■□□ 2.6
SNRPA1-215ENST00000561187 RXRAP19793 462 aa31.28■■■□□ 2.6
SNRPA1-215ENST00000561187 HIC1Q14526 733 aa31.28■■■□□ 2.6
SNRPA1-215ENST00000561187 TCTN1Q2MV58 587 aa31.28■■■□□ 2.6
SNRPA1-215ENST00000561187 ARNTL2Q8WYA1 636 aa31.28■■■□□ 2.6
SNRPA1-215ENST00000561187 DOCK5Q9H7D0 1870 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 PRC1O43663 620 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 NBNO60934 754 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 WDR5P61964 334 aaKnown RBP31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 DEFB103AP81534 67 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 TRAF1Q13077 416 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 CASC1Q6TDU7 716 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 NFXL1Q6ZNB6 911 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 CTCFLQ8NI51 663 aaPredicted RBP31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 SYMPKQ92797 1274 aaKnown RBP31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 RTEL1Q9NZ71 1219 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 MUC3AQ02505 3323 aa31.27■■■□□ 2.6
SNRPA1-215ENST00000561187 PLEKHA8P1O95397 391 aa31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 KRT40Q6A162 431 aa31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 KCNV1Q6PIU1 500 aa31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 SKAP1Q86WV1 359 aa31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 CMTR1Q8N1G2 835 aaKnown RBP31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 PRRC2BQ5JSZ5 2229 aaKnown RBP31.26■■■□□ 2.59
SNRPA1-215ENST00000561187 TLL1O43897 1013 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 BAIAP3O94812 1187 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 HOXD8P13378 290 aaPredicted RBP31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 MRPS9P82933 396 aaKnown RBP31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 ZNF618Q5T7W0 954 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 USP17L6PQ6QN14 398 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 SAMD3Q8N6K7 520 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 PHOSPHO2Q8TCD6 241 aa31.25■■■□□ 2.59
SNRPA1-215ENST00000561187 LCHNA4D1U4 455 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 KIF28PB7ZC32 967 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 SP4Q02446 784 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 TAP1Q03518 808 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 PTK7Q13308 1070 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 SKIV2LQ15477 1246 aaKnown RBP31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 TRIM71Q2Q1W2 868 aaKnown RBP31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 SMARCC2Q8TAQ2 1214 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 RRP36Q96EU6 259 aaKnown RBP31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 LRRC2Q9BYS8 371 aa31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 LSG1Q9H089 658 aaKnown RBP31.24■■■□□ 2.59
SNRPA1-215ENST00000561187 NOP56O00567 594 aaKnown RBP31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 PPFIA4O75335 1185 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 DDAH1O94760 285 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 RBL2Q08999 1139 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 GNPTABQ3T906 1256 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 FAM117BQ6P1L5 589 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 CNKSR3Q6P9H4 555 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 C16orf70Q9BSU1 422 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 SEC63Q9UGP8 760 aaKnown RBP31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 TELO2Q9Y4R8 837 aa31.23■■■□□ 2.59
SNRPA1-215ENST00000561187 XIRP2A4UGR9 3374 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 TRANK1O15050 2925 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 SH2B2O14492 632 aaPredicted RBP31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 LGALS2P05162 132 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 SEMA3FQ13275 785 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 MBTPS1Q14703 1052 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 TRAF7Q6Q0C0 670 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 CYFIP1Q7L576 1253 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 TRIM50Q86XT4 487 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 ZBED2Q9BTP6 218 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 SPZ1Q9BXG8 430 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 FRMPD4Q14CM0 1322 aa31.22■■■□□ 2.59
SNRPA1-215ENST00000561187 hCG_1642624A0A1W2PR95 340 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 CCDC69A6NI79 296 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 SLC27A2O14975 620 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 TGFB3P10600 412 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 KIF5BP33176 963 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 THPOP40225 353 aa31.21■■■□□ 2.59
SNRPA1-215ENST00000561187 ATXN2LQ8WWM7 1075 aaKnown RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms