RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	USP17L18	D6R9N7	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L22	D6RA61	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L17	D6RBQ6	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L19	D6RCP7	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L20	D6RJB6	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	ATF7	P17544	494 aa	Predicted RBP	10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L24	Q0WX57	530 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L6P	Q6QN14	398 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	SGMS1	Q86VZ5	419 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF579	Q8NAF0	562 aa	Known RBP	10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	KIF2C	Q99661	725 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	NACA2	Q9H009	215 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	RAB20	Q9NX57	234 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	IQSEC2	Q5JU85	1478 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	INO80B-WBP1	J3KQ70	363 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	ORC4	O43929	436 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	LACTB	P83111	547 aa	Predicted RBP	10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	PTK2	Q05397	1052 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	CUL4B	Q13620	913 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	RCSD1	Q6JBY9	416 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	SESTD1	Q86VW0	696 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	JPH2	Q9BR39	696 aa	Predicted RBP	10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	INO80B	Q9C086	356 aa	Predicted RBP	10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	BHMT2	Q9H2M3	363 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLPH3L	Q9H4A5	285 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	AKT3	Q9Y243	479 aa		10.21	□□□□□ -0.77
NEO1-208	ENST00000560328	STAM2	O75886	525 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	ATP1A3	P13637	1013 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	EXOSC10	Q01780	885 aa	Known RBP	10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	RNF207	Q6ZRF8	634 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	VSTM4	Q8IW00	320 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	MED10	Q9BTT4	135 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	TRIM7	Q9C029	511 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	ALDH3A1	P30838	453 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	NSF	P46459	744 aa	Known RBP	10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	IRX5	P78411	483 aa	Predicted RBP	10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	EN1	Q05925	392 aa	Predicted RBP	10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	EHHADH	Q08426	723 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	ITPK1	Q13572	414 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	MTMR3	Q13615	1198 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	MTERF2	Q49AM1	385 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	SCYL2	Q6P3W7	929 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	TBC1D16	Q8TBP0	767 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	ZNF609	O15014	1411 aa		10.21	□□□□□ -0.78
NEO1-208	ENST00000560328	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	EFCAB8	A8MWE9	144 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PSAP	P07602	524 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	LMNB1	P20700	586 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	GUCY2F	P51841	1108 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	SETDB1	Q15047	1291 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	CCDC6	Q16204	474 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PRR5L	Q6MZQ0	368 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	SMC6	Q96SB8	1091 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PPAN	Q9NQ55	473 aa	Known RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PREX1	Q8TCU6	1659 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	BRD3	Q15059	726 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	ADAT2	Q7Z6V5	191 aa	Known RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	CROCCP2	Q86T23	111 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	STIM2	Q9P246	746 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	HESX1	Q9UBX0	185 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	SERPINA10	Q9UK55	444 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	ADGRB1	O14514	1584 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	DIP2B	Q9P265	1576 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	TECPR2	O15040	1411 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PALM3	A6NDB9	673 aa	Predicted RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	POTEM	A6NI47	508 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PPARD	Q03181	441 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	HADH	Q16836	314 aa	Known RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	BARGIN	Q6ZT62	677 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	TMEM260	Q9NX78	707 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PARP2	Q9UGN5	583 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	ZDHHC9	Q9Y397	364 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	SPATA31A6	Q5VVP1	1343 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	BPIFB4	P59827	614 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	ITIH3	Q06033	890 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	TCP11X2	Q5H9J9	407 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	CFAP157	Q5JU67	520 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	C12orf60	Q5U649	245 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	CCDC125	Q86Z20	511 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	SLC35F6	Q8N357	371 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	BARHL2	Q9NY43	387 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	GDA	Q9Y2T3	454 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	PCDHB4	Q9Y5E5	795 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	IQGAP1	P46940	1657 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	ENC1	O14682	589 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	IFNB1	P01574	187 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	CRAMP1	Q96RY5	1269 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	RIOK1	Q9BRS2	568 aa	Known RBP	10.2	□□□□□ -0.78
NEO1-208	ENST00000560328	FEM1B	Q9UK73	627 aa		10.2	□□□□□ -0.78
NEO1-208	ENST00000560328		F5H6K3	240 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	NTSR2	O95665	410 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	CASP1	P29466	404 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	CHRNA5	P30532	468 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	POLR2B	P30876	1174 aa	Known RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	DDIT3	P35638	169 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	KLRC3	Q07444	240 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	MKRN3	Q13064	507 aa	Known RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	KRT81	Q14533	505 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	MICALL1	Q8N3F8	863 aa		10.19	□□□□□ -0.78

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