RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
LINC02253-202ENST00000560314 DHX37Q8IY37 1157 aaKnown RBP12.98□□□□□ -0.33
LINC02253-202ENST00000560314 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 PDCD2LQ9BRP1 358 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 HDAC6Q9UBN7 1215 aa12.98□□□□□ -0.33
LINC02253-202ENST00000560314 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
LINC02253-202ENST00000560314 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 REV3LO60673 3130 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 OPLAHO14841 1288 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 ZBTB5O15062 677 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 PPFIA4O75335 1185 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 ZNF286BP0CG31 522 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 TGFB3P10600 412 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 DEFB103AP81534 67 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 IKBKEQ14164 716 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 NECAB3Q96P71 396 aaPredicted RBP12.97□□□□□ -0.33
LINC02253-202ENST00000560314 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
LINC02253-202ENST00000560314 RAD9AQ99638 391 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
LINC02253-202ENST00000560314 TRIM71Q2Q1W2 868 aaKnown RBP12.96□□□□□ -0.33
LINC02253-202ENST00000560314 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
LINC02253-202ENST00000560314 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
LINC02253-202ENST00000560314 KRT40Q6A162 431 aa12.96□□□□□ -0.33
LINC02253-202ENST00000560314 KAT6AQ92794 2004 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 CAND2O75155 1236 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 LGR5O75473 907 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 UBA1P22314 1058 aaKnown RBP12.95□□□□□ -0.34
LINC02253-202ENST00000560314 PLA2G5P39877 138 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 ERVK-21P61565 698 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 PGM5Q15124 567 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 SEC23AQ15436 765 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 TRAF7Q6Q0C0 670 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 VSIG10LQ86VR7 867 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 SPATA33Q96N06 139 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 VAT1LQ9HCJ6 419 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 MAD2L2Q9UI95 211 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
LINC02253-202ENST00000560314 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
LINC02253-202ENST00000560314 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 LINC01553A4QN01 128 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
LINC02253-202ENST00000560314 PPP1R11O60927 126 aaPredicted RBP12.94□□□□□ -0.34
LINC02253-202ENST00000560314 STAM2O75886 525 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 RGS20O76081 388 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 GGPS1O95749 300 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 CCND2P30279 289 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 HOXC8P31273 242 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 TRDNQ13061 729 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
LINC02253-202ENST00000560314 MBTPS1Q14703 1052 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 GNPTABQ3T906 1256 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
LINC02253-202ENST00000560314 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 RSPH10B2B2RC85 870 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 GCOM1H8Y6P7 765 aaPredicted RBP12.93□□□□□ -0.34
LINC02253-202ENST00000560314 AMHP03971 560 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 RSPH10BP0C881 870 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 POLR2MP0CAP2 368 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 MYCLP12524 364 aaPredicted RBP12.93□□□□□ -0.34
LINC02253-202ENST00000560314 GRM4Q14833 912 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 SPRED2Q7Z698 418 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
LINC02253-202ENST00000560314 WNT8BQ93098 351 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 SAMD11Q96NU1 681 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 SUGCTQ9HAC7 445 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 MLXIPQ9HAP2 919 aa12.93□□□□□ -0.34
LINC02253-202ENST00000560314 ERICH2A1L162 156 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 C17orf102A2RUQ5 167 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 H3BRB1 525 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
LINC02253-202ENST00000560314 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
LINC02253-202ENST00000560314 THPOP40225 353 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
LINC02253-202ENST00000560314 NEDD9Q14511 834 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
LINC02253-202ENST00000560314 TCTN1Q2MV58 587 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 IL31RAQ8NI17 732 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
LINC02253-202ENST00000560314 ATP6V0A1Q93050 837 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 USP26Q9BXU7 913 aa12.92□□□□□ -0.34
LINC02253-202ENST00000560314 TUT1Q9H6E5 874 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms