RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ZNF200P98182 395 aaPredicted RBP21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 WTAPQ15007 396 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 DGKDQ16760 1214 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 PPP2R2DQ66LE6 453 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 RUFY2Q8WXA3 655 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 C16orf70Q9BSU1 422 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 LSG1Q9H089 658 aaKnown RBP21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 TELO2Q9Y4R8 837 aa21.8■■□□□ 1.08
CDC42BPB-206ENST00000559790 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 SORBS3O60504 671 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 CXCL10P02778 98 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 MYCLP12524 364 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 CHMP4BP1P59074 171 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 TRDNQ13061 729 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 MKRN4PQ13434 485 aaPredicted RBP21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 BFSP2Q13515 415 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 MFSD10Q14728 455 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 CELF3Q5SZQ8 465 aaKnown RBP21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 SAMD3Q8N6K7 520 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 CAGE1Q8TC20 777 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 AFAP1L1Q8TED9 768 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 SLC9A7Q96T83 725 aa21.79■■□□□ 1.08
CDC42BPB-206ENST00000559790 RALGAPA2Q2PPJ7 1873 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 GGPS1O95749 300 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 CKBP12277 381 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 LAMC2Q13753 1193 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 KIAA0753Q2KHM9 967 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 TMEM67Q5HYA8 995 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 LRRC8DQ7L1W4 858 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 TMCO2Q7Z6W1 182 aaPredicted RBP21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 RALYLQ86SE5 291 aaKnown RBP21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 SKAP1Q86WV1 359 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 HERC6Q8IVU3 1022 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 INPP4AQ96PE3 977 aaPredicted RBP21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 SPZ1Q9BXG8 430 aa21.78■■□□□ 1.08
CDC42BPB-206ENST00000559790 RFXAPO00287 272 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 SELPP16109 830 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 WDR5P61964 334 aaKnown RBP21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 DEFB103AP81534 67 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 TAP1Q03518 808 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 DHX37Q8IY37 1157 aaKnown RBP21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 ZNF654Q8IZM8 581 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 ALG1Q9BT22 464 aa21.77■■□□□ 1.08
CDC42BPB-206ENST00000559790 KIAA1671Q9BY89 1806 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 LCHNA4D1U4 455 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 GCOM1H8Y6P7 765 aaPredicted RBP21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 PLEKHA8P1O95397 391 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 POLR2MP0CAP2 368 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 FCHSD1Q86WN1 690 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 RETREG2Q8NC44 543 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 PPM1EQ8WY54 764 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 OSBPL7Q9BZF2 842 aa21.76■■□□□ 1.07
CDC42BPB-206ENST00000559790 COL4A6Q14031 1691 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 SH2B2O14492 632 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 MEIS2O14770 477 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 BAIAP3O94812 1187 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 CCND2P30279 289 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 ICAM3P32942 547 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 CCDC85BQ15834 202 aaPredicted RBP21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 TJAP1Q5JTD0 557 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 KRT40Q6A162 431 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 PHOSPHO2Q8TCD6 241 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 SPATA33Q96N06 139 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 MAP3K14Q99558 947 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 NOD1Q9Y239 953 aa21.75■■□□□ 1.07
CDC42BPB-206ENST00000559790 LPXNO60711 386 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 DDAH1O94760 285 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 ACTN1P12814 892 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 POU3F3P20264 500 aaPredicted RBP21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 PTK7Q13308 1070 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 ZNF618Q5T7W0 954 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 SERINC5Q86VE9 423 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 SRBD1Q8N5C6 995 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 PIBF1Q8WXW3 757 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 ESYT1Q9BSJ8 1104 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 KATNAL1Q9BW62 490 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 CERS4Q9HA82 394 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 THEGQ9P2T0 379 aa21.74■■□□□ 1.07
CDC42BPB-206ENST00000559790 ERICH2A1L162 156 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 SLC27A2O14975 620 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 PRC1O43663 620 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 PPFIA4O75335 1185 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 TGFB3P10600 412 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 IGFBP4P22692 258 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 KCNV1Q6PIU1 500 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 USP17L6PQ6QN14 398 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 CATIPQ7Z7H3 387 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 CCDC155Q8N6L0 562 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 C7orf31Q8N865 590 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 FTOQ9C0B1 505 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 MTCH2Q9Y6C9 303 aa21.73■■□□□ 1.07
CDC42BPB-206ENST00000559790 SPATA31C2B4DYI2 1134 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 LGALS2P05162 132 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 RXRAP19793 462 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 SART3Q15020 963 aaKnown RBP21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 NECTIN1Q15223 517 aa21.72■■□□□ 1.07
CDC42BPB-206ENST00000559790 CNKSR3Q6P9H4 555 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms