RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 CTAGE5O15320 804 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 SEPT4O43236 478 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 MYCP01106 439 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-209ENST00000559728 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 SMPD1P17405 629 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 U2AF2P26368 475 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMG20A-209ENST00000559728 ICAM3P32942 547 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 SP2Q02086 613 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 PDE4DQ08499 809 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 STXBP2Q15833 593 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 GJC2Q5T442 439 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-209ENST00000559728 XRRA1Q6P2D8 792 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 FAM184AQ8NB25 1140 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 BICD2Q8TD16 824 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 ABHD8Q96I13 439 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMG20A-209ENST00000559728 RTEL1Q9NZ71 1219 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 ZHX1Q9UKY1 873 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-209ENST00000559728 CNPY2Q9Y2B0 182 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 SPATA31C2B4DYI2 1134 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 MEIS1O00470 390 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 ATP9AO75110 1047 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 MYCLP12524 364 aaPredicted RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 XBP1P17861 261 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 SYT1P21579 422 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 CCND2P30279 289 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 DDIT3P35638 169 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 KRT2P35908 639 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 TOB1P50616 345 aaPredicted RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 NKX3-2P78367 333 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 PKP1Q13835 747 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 INF2Q27J81 1249 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 MCTP2Q6DN12 878 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 PIK3AP1Q6ZUJ8 805 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 KRT25Q7Z3Z0 450 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 COPS5Q92905 334 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 MXRA8Q9BRK3 442 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 FOXP1Q9H334 677 aaPredicted RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 JADE2Q9NQC1 790 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 DDX20Q9UHI6 824 aaKnown RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 DDX41Q9UJV9 622 aaKnown RBP10.32□□□□□ -0.76
HMG20A-209ENST00000559728 MTMR6Q9Y217 621 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
HMG20A-209ENST00000559728 RBBP6Q7Z6E9 1792 aaKnown RBP10.31□□□□□ -0.76
HMG20A-209ENST00000559728 CYP3A7-CYP3A51PA0A087WV96 503 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 MYADML2A6NDP7 307 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 ADAMTS4O75173 837 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 STAM2O75886 525 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 TDP2O95551 362 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 GJB1P08034 283 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 ARP10275 920 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 AKR1A1P14550 325 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 KCNA2P16389 499 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 CYP3A7P24462 503 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 NONOQ15233 471 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMG20A-209ENST00000559728 LY6KQ17RY6 165 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 DUSP28Q4G0W2 176 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 CEP55Q53EZ4 464 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 ANO1Q5XXA6 986 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 LARP1BQ659C4 914 aaKnown RBP10.31□□□□□ -0.76
HMG20A-209ENST00000559728 IQSEC1Q6DN90 963 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 CCSAPQ6IQ19 270 aaPredicted RBP10.31□□□□□ -0.76
HMG20A-209ENST00000559728 SEPT14Q6ZU15 432 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 RNF208Q9H0X6 261 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 OGDHLQ9ULD0 1010 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
HMG20A-209ENST00000559728 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 SLC37A4O43826 429 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 DUSP11O75319 330 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 UBA1P22314 1058 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 GJA8P48165 433 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 USP11P51784 963 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 ARHGAP1Q07960 439 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 RESTQ13127 1097 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 ITGB3BPQ13352 177 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 TRIM29Q14134 588 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 NIPA1Q7RTP0 329 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 NOSTRINQ8IVI9 506 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 TNS4Q8IZW8 715 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 KLHDC9Q8NEP7 349 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 U2AF1L4Q8WU68 220 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 SCFD2Q8WU76 684 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 GPRASP2Q96D09 838 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 DEFB118Q96PH6 123 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 UPF3AQ9H1J1 476 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 KCNH7Q9NS40 1196 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 ZNFX1Q9P2E3 1918 aaKnown RBP10.3□□□□□ -0.76
HMG20A-209ENST00000559728 SYNRGQ9UMZ2 1314 aa10.3□□□□□ -0.76
HMG20A-209ENST00000559728 PLXNA1Q9UIW2 1896 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms