RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 DNERQ8NFT8 737 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 TOX2Q96NM4 488 aa17.82■□□□□ 0.44
LINC01220-201ENST00000558575 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
LINC01220-201ENST00000558575 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
LINC01220-201ENST00000558575 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 hCG_1984214I3L0E3 225 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 DEXIO95424 95 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 ACRP10323 421 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 RARBP10826 455 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 AKAP17AQ02040 695 aaKnown RBP17.81■□□□□ 0.44
LINC01220-201ENST00000558575 PPIGQ13427 754 aaKnown RBP eCLIP17.81■□□□□ 0.44
LINC01220-201ENST00000558575 UBE2SQ16763 222 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 PPP1R18Q6NYC8 613 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 ZNF365Q70YC5 407 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 RNF180Q86T96 592 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 FCHSD1Q86WN1 690 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 TRIM22Q8IYM9 498 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 MICALL1Q8N3F8 863 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 ZNF713Q8N859 430 aaPredicted RBP17.81■□□□□ 0.44
LINC01220-201ENST00000558575 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 RMDN3Q96TC7 470 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 VPS54Q9P1Q0 977 aa17.81■□□□□ 0.44
LINC01220-201ENST00000558575 FAM86C2PA6NEL3 165 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 ASB14A6NK59 587 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 DCDC2CA8MYV0 355 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 ADAMTS4O75173 837 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 CDKL5O76039 1030 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 ACVR2BQ13705 512 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 NSUN6Q8TEA1 469 aaKnown RBP17.8■□□□□ 0.44
LINC01220-201ENST00000558575 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
LINC01220-201ENST00000558575 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
LINC01220-201ENST00000558575 NRBP1Q9UHY1 535 aa17.8■□□□□ 0.44
LINC01220-201ENST00000558575 COL4A4P53420 1690 aaPredicted RBP17.8■□□□□ 0.44
LINC01220-201ENST00000558575 STK36Q9NRP7 1315 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 LOC102724159A0A0B4J2E5 919 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 ESYT2A0FGR8 921 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 EIF2AK2P19525 551 aaKnown RBP17.79■□□□□ 0.44
LINC01220-201ENST00000558575 PWP2Q15269 919 aaKnown RBP17.79■□□□□ 0.44
LINC01220-201ENST00000558575 NPY5RQ15761 445 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 RAB30Q15771 203 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 TMEM63BQ5T3F8 832 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 TAPT1Q6NXT6 567 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 IL31RAQ8NI17 732 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
LINC01220-201ENST00000558575 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 MSRAQ9UJ68 235 aa17.79■□□□□ 0.44
LINC01220-201ENST00000558575 ADCY6O43306 1168 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 NR3C2P08235 984 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
LINC01220-201ENST00000558575 MRPL12P52815 198 aaKnown RBP17.78■□□□□ 0.44
LINC01220-201ENST00000558575 ACLYP53396 1101 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 ARHGEF16Q5VV41 709 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 EEPD1Q7L9B9 569 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 VSIG10LQ86VR7 867 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 CUL5Q93034 780 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 SNX27Q96L92 541 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 IWS1Q96ST2 819 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 STARD7Q9NQZ5 370 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 SH3GLB2Q9NR46 395 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
LINC01220-201ENST00000558575 SCN5AQ14524 2016 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 FRMPD4Q14CM0 1322 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 GPR37L1O60883 481 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 MCM2P49736 904 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 ADCY7P51828 1080 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 PGM5Q15124 567 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.44
LINC01220-201ENST00000558575 FBXO16Q8IX29 292 aaPredicted RBP17.77■□□□□ 0.44
LINC01220-201ENST00000558575 ZFP91Q96JP5 570 aaPredicted RBP17.77■□□□□ 0.44
LINC01220-201ENST00000558575 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
LINC01220-201ENST00000558575 SLC28A3Q9HAS3 691 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 ZHX1Q9UKY1 873 aaPredicted RBP17.77■□□□□ 0.44
LINC01220-201ENST00000558575 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.44
LINC01220-201ENST00000558575 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.76■□□□□ 0.43
LINC01220-201ENST00000558575 RGS20O76081 388 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 PTGS1P23219 599 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
LINC01220-201ENST00000558575 MRPS9P82933 396 aaKnown RBP17.76■□□□□ 0.43
LINC01220-201ENST00000558575 PDE4DQ08499 809 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 AAK1Q2M2I8 961 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 CCSAPQ6IQ19 270 aaPredicted RBP17.76■□□□□ 0.43
LINC01220-201ENST00000558575 PGBD1Q96JS3 809 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 TSEN34Q9BSV6 310 aaKnown RBP17.76■□□□□ 0.43
LINC01220-201ENST00000558575 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 KCNJ14Q9UNX9 436 aa17.76■□□□□ 0.43
LINC01220-201ENST00000558575 PTPRSQ13332 1948 aa17.75■□□□□ 0.43
LINC01220-201ENST00000558575 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
LINC01220-201ENST00000558575 MYADML2A6NDP7 307 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms