RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 ALAS1P13196 640 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 GJB2P29033 226 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 FCGRTP55899 365 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 TRIM29Q14134 588 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 GRB14Q14449 540 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 PLS1Q14651 629 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 USH1GQ495M9 461 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 CCDC174Q6PII3 467 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 GPR142Q7Z601 462 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 CCAR1Q8IX12 1150 aaKnown RBP7.49□□□□□ -1.21
SEL1L-203ENST00000554744 MSL3Q8N5Y2 521 aaKnown RBP7.49□□□□□ -1.21
SEL1L-203ENST00000554744 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 USP6NLQ92738 828 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 ERO1AQ96HE7 468 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 C8orf76Q96K31 380 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 PORCNQ9H237 461 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 SLC5A4Q9NY91 659 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 RIPK3Q9Y572 518 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 MGAMO43451 1857 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 FRMPD4Q14CM0 1322 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 SMCHD1A6NHR9 2005 aa7.49□□□□□ -1.21
SEL1L-203ENST00000554744 hCG_1642624A0A1W2PR95 340 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 SMCO2A6NFE2 343 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 B4DLN1 442 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 GCOM1H8Y6P7 765 aaPredicted RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 M0R2N6 131 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 NFIBO00712 420 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 MEIS2O14770 477 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 TBC1D8O95759 1140 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 POLR2MP0CAP2 368 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 HOXD10P28358 340 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 CLK2P49760 499 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 ADCY7P51828 1080 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 SNAP25P60880 206 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 KCTD2Q14681 263 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 SAFBQ15424 915 aaKnown RBP eCLIP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 NPY5RQ15761 445 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 MUM1L1Q5H9M0 696 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 LARP1BQ659C4 914 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 KRT40Q6A162 431 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 XRRA1Q6P2D8 792 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 RNF207Q6ZRF8 634 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 NCAPG2Q86XI2 1143 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 TRMT44Q8IYL2 757 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 REXO1Q8N1G1 1221 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 ANKRD35Q8N283 1001 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 FAM133AQ8N9E0 248 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 MORC4Q8TE76 937 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 COA7Q96BR5 231 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 FOXP1Q9H334 677 aaPredicted RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 R3HDMLQ9H3Y0 253 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 A1CFQ9NQ94 594 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 ADD3Q9UEY8 706 aaKnown RBP7.48□□□□□ -1.21
SEL1L-203ENST00000554744 PCDHA4Q9UN74 947 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 PLXNB2O15031 1838 aa7.48□□□□□ -1.21
SEL1L-203ENST00000554744 TNPO2O14787 897 aaKnown RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 STAM2O75886 525 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 IGHA2P01877 340 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 U2AF2P26368 475 aaKnown RBP eCLIP7.47□□□□□ -1.213e-7■■■■■ 27.8
SEL1L-203ENST00000554744 ADORA2AP29274 412 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 DDIT3P35638 169 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 CTCFP49711 727 aaPredicted RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 MMP16P51512 607 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 RPS6P62753 249 aaKnown RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 SKOR1P84550 965 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 ORC2Q13416 577 aaPredicted RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 ZNF792Q3KQV3 632 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 OLFML2BQ68BL8 750 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 MAMDC4Q6UXC1 1216 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 KRT25Q7Z3Z0 450 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 BLIDQ8IZY5 108 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 NSUN6Q8TEA1 469 aaKnown RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 ZNF296Q8WUU4 475 aaPredicted RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 CRYGNQ8WXF5 182 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 TNFRSF25Q93038 417 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 IWS1Q96ST2 819 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 MMP19Q99542 508 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 MPHOSPH6Q99547 160 aaKnown RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 APBA2Q99767 749 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 EHMT1Q9H9B1 1298 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 EFCC1Q9HA90 598 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 HOMER2Q9NSB8 354 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 VPS54Q9P1Q0 977 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 DAXXQ9UER7 740 aaPredicted RBP7.47□□□□□ -1.21
SEL1L-203ENST00000554744 NRBP1Q9UHY1 535 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 GJD2Q9UKL4 321 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 RPTORQ8N122 1335 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 SYNGAP1Q96PV0 1343 aa7.47□□□□□ -1.21
SEL1L-203ENST00000554744 ZNFX1Q9P2E3 1918 aaKnown RBP7.46□□□□□ -1.21
SEL1L-203ENST00000554744 DOCK3Q8IZD9 2030 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms