RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 BMP2KLQ5H9B9 411 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 CELF3Q5SZQ8 465 aaKnown RBP26.67■■□□□ 1.86
TROAP-216ENST00000551567 C7orf31Q8N865 590 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 TET1Q8NFU7 2136 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 LRRC2Q9BYS8 371 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 PRDM12Q9H4Q4 367 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 HDAC6Q9UBN7 1215 aa26.67■■□□□ 1.86
TROAP-216ENST00000551567 SEC63Q9UGP8 760 aaKnown RBP26.67■■□□□ 1.86
TROAP-216ENST00000551567 F2P00734 622 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 KIAA0753Q2KHM9 967 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 HSDL1Q3SXM5 330 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 CMTR1Q8N1G2 835 aaKnown RBP26.66■■□□□ 1.86
TROAP-216ENST00000551567 TMTC2Q8N394 836 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 CCDC155Q8N6L0 562 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 KATNAL1Q9BW62 490 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 FTOQ9C0B1 505 aaKnown RBP eCLIP26.66■■□□□ 1.86
TROAP-216ENST00000551567 SLC28A3Q9HAS3 691 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 GTF2IRD1Q9UHL9 959 aa26.66■■□□□ 1.86
TROAP-216ENST00000551567 FRMPD4Q14CM0 1322 aa26.65■■□□□ 1.86
TROAP-216ENST00000551567 ACTN1P12814 892 aa26.65■■□□□ 1.86
TROAP-216ENST00000551567 ATP2A2P16615 1042 aaKnown RBP26.65■■□□□ 1.86
TROAP-216ENST00000551567 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
TROAP-216ENST00000551567 CAGE1Q8TC20 777 aa26.65■■□□□ 1.86
TROAP-216ENST00000551567 DHX38Q92620 1227 aaKnown RBP26.65■■□□□ 1.86
TROAP-216ENST00000551567 LZTS2Q9BRK4 669 aa26.65■■□□□ 1.86
TROAP-216ENST00000551567 CHD7Q9P2D1 2997 aa26.65■■□□□ 1.86
TROAP-216ENST00000551567 HOXD8P13378 290 aaPredicted RBP26.64■■□□□ 1.86
TROAP-216ENST00000551567 MYOGP15173 224 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 LIFRP42702 1097 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 GNAQP50148 359 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 MRPS9P82933 396 aaKnown RBP26.64■■□□□ 1.86
TROAP-216ENST00000551567 USP17L6PQ6QN14 398 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 SMARCC2Q8TAQ2 1214 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 AFAP1L1Q8TED9 768 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 GAS2L1Q99501 681 aaPredicted RBP26.64■■□□□ 1.86
TROAP-216ENST00000551567 MLXIPQ9HAP2 919 aa26.64■■□□□ 1.86
TROAP-216ENST00000551567 HAS3O00219 553 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 PPFIA4O75335 1185 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 TGFB3P10600 412 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 SMARCA1P28370 1054 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 GNPTABQ3T906 1256 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 CUL5Q93034 780 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 BCAS3Q9H6U6 928 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 RTEL1Q9NZ71 1219 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 SLC12A7Q9Y666 1083 aa26.63■■□□□ 1.85
TROAP-216ENST00000551567 CALM1P0DP23 149 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 CALM2P0DP24 149 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 CALM3P0DP25 149 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 USP38Q8NB14 1042 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 PCDHA11Q9Y5I1 949 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 PTPRSQ13332 1948 aa26.62■■□□□ 1.85
TROAP-216ENST00000551567 hCG_1642624A0A1W2PR95 340 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 SELPP16109 830 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 RNF20Q5VTR2 975 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 PPP2R2DQ66LE6 453 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 LRRC8DQ7L1W4 858 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 MICU3Q86XE3 530 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 CCDC82Q8N4S0 544 aa26.61■■□□□ 1.85
TROAP-216ENST00000551567 INPP4AQ96PE3 977 aaPredicted RBP26.61■■□□□ 1.85
TROAP-216ENST00000551567 MEIS2O14770 477 aa26.6■■□□□ 1.85
TROAP-216ENST00000551567 STAM2O75886 525 aa26.6■■□□□ 1.85
TROAP-216ENST00000551567 ZNF200P98182 395 aaPredicted RBP26.6■■□□□ 1.85
TROAP-216ENST00000551567 COL25A1Q9BXS0 654 aaPredicted RBP26.6■■□□□ 1.85
TROAP-216ENST00000551567 PIK3CDO00329 1044 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 CKBP12277 381 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 SEMA3FQ13275 785 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 TMTC3Q6ZXV5 915 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 FANCBQ8NB91 859 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 PPM1EQ8WY54 764 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 WNT8BQ93098 351 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 SLC9A7Q96T83 725 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 C16orf70Q9BSU1 422 aa26.59■■□□□ 1.85
TROAP-216ENST00000551567 SPATA31C2B4DYI2 1134 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 RBAK-RBAKDNI3L0D1 243 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 NOP56O00567 594 aaKnown RBP26.58■■□□□ 1.85
TROAP-216ENST00000551567 FIBPO43427 364 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 ICAM3P32942 547 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 RBL2Q08999 1139 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 PTK7Q13308 1070 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 ADGRE1Q14246 886 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 HIC1Q14526 733 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 GPNMBQ14956 572 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 PCNX4Q63HM2 1172 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 CYFIP1Q7L576 1253 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 SGMS1Q86VZ5 419 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 TCEANC2Q96MN5 208 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 NEK1Q96PY6 1258 aa26.58■■□□□ 1.85
TROAP-216ENST00000551567 CDC45O75419 566 aa26.57■■□□□ 1.84
TROAP-216ENST00000551567 LGALS2P05162 132 aa26.57■■□□□ 1.84
TROAP-216ENST00000551567 IGFBP4P22692 258 aa26.57■■□□□ 1.84
TROAP-216ENST00000551567 NEDD9Q14511 834 aa26.57■■□□□ 1.84
TROAP-216ENST00000551567 PSTPIP2Q9H939 334 aa26.57■■□□□ 1.84
TROAP-216ENST00000551567 H3BRB1 525 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 BAIAP3O94812 1187 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 CA3P07451 260 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 SP4Q02446 784 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 UBE2SQ16763 222 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 TRIM71Q2Q1W2 868 aaKnown RBP26.56■■□□□ 1.84
TROAP-216ENST00000551567 METTL7BQ6UX53 244 aa26.56■■□□□ 1.84
TROAP-216ENST00000551567 SYNE3Q6ZMZ3 975 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms