RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CHMP5Q9NZZ3 219 aa15.35■□□□□ 0.05
ERBB3-215ENST00000550828 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 RBM47A0AV96 593 aaKnown RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 CCNT1O60563 726 aaKnown RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 HMGCRP04035 888 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 PDIA4P13667 645 aaKnown RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 GRK4P32298 578 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 MCM7P33993 719 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 TRAPPC10P48553 1259 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 NUCB2P80303 420 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 SP2Q02086 613 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 ZNF174Q15697 407 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 PRR16Q569H4 304 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 GJC2Q5T442 439 aaPredicted RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 PPP4R3AQ6IN85 833 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 CCDC62Q6P9F0 684 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 SEPT14Q6ZU15 432 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 NIPA1Q7RTP0 329 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 PLA2G4DQ86XP0 818 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 ETNPPLQ8TBG4 499 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 LENG1Q96BZ8 264 aaPredicted RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 USP28Q96RU2 1077 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 VTA1Q9NP79 307 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 TELO2Q9Y4R8 837 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 CLIC4Q9Y696 253 aa15.34■□□□□ 0.05
ERBB3-215ENST00000550828 MYH9P35579 1960 aaKnown RBP15.34■□□□□ 0.05
ERBB3-215ENST00000550828 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 ATP9AO75110 1047 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 STAM2O75886 525 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 PRKAR2AP13861 404 aaKnown RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 CCND3P30281 292 aaPredicted RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 ICAM3P32942 547 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 ADCYAP1R1P41586 468 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 Q4G0T1 1027 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 MFSD14CQ5VZR4 134 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 HAS1Q92839 578 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 GPRASP2Q96D09 838 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 ABHD16BQ9H3Z7 469 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 AGO4Q9HCK5 861 aaKnown RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 KCNMB3Q9NPA1 279 aa15.33■□□□□ 0.04
ERBB3-215ENST00000550828 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 NOL7Q9UMY1 257 aaKnown RBP15.33■□□□□ 0.04
ERBB3-215ENST00000550828 MSH4O15457 936 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
ERBB3-215ENST00000550828 KCNA2P16389 499 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 ZNF76P36508 570 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
ERBB3-215ENST00000550828 ITGB3BPQ13352 177 aaPredicted RBP15.32■□□□□ 0.04
ERBB3-215ENST00000550828 MTMR1Q13613 665 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 PTPAQ15257 358 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 CCDC144BQ3MJ40 725 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 COPS5Q92905 334 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 KCNH7Q9NS40 1196 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 PKD2L1Q9P0L9 805 aa15.32■□□□□ 0.04
ERBB3-215ENST00000550828 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
ERBB3-215ENST00000550828 KIAA0100Q14667 2235 aaKnown RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 B4DLN1 442 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 DHX15O43143 795 aaKnown RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 FIBPO43427 364 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 NEMFO60524 1076 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 SMPD1P17405 629 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 IL17AQ16552 155 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 ANO1Q5XXA6 986 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 SLC5A5Q92911 643 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 MPHOSPH6Q99547 160 aaKnown RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 NRBP1Q9UHY1 535 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
ERBB3-215ENST00000550828 CNPY2Q9Y2B0 182 aa15.31■□□□□ 0.04
ERBB3-215ENST00000550828 SORBS3O60504 671 aa15.3■□□□□ 0.04
ERBB3-215ENST00000550828 NASPP49321 788 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 ATP2C1P98194 919 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 SETQ01105 290 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 CEBPZQ03701 1054 aaKnown RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 PTGDRQ13258 359 aa15.3■□□□□ 0.04
ERBB3-215ENST00000550828 MTFR1Q15390 333 aa15.3■□□□□ 0.04
ERBB3-215ENST00000550828 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
ERBB3-215ENST00000550828 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
ERBB3-215ENST00000550828 GNEQ9Y223 722 aaKnown RBP15.3■□□□□ 0.04
ERBB3-215ENST00000550828 IPO5O00410 1097 aaKnown RBP15.29■□□□□ 0.04
ERBB3-215ENST00000550828 PSMD10O75832 226 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 ARHGAP1Q07960 439 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
ERBB3-215ENST00000550828 CALCRLQ16602 461 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 GNPTABQ3T906 1256 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
ERBB3-215ENST00000550828 ARMC5Q96C12 935 aa15.29■□□□□ 0.04
ERBB3-215ENST00000550828 NAP1L4Q99733 375 aaKnown RBP15.29■□□□□ 0.04
ERBB3-215ENST00000550828 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms