RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
CDK4-206ENST00000549606 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
CDK4-206ENST00000549606 PCDHA11Q9Y5I1 949 aa18.21■□□□□ 0.51
CDK4-206ENST00000549606 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 DDAH1O94760 285 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 F2P00734 622 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 TGFB3P10600 412 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 UBA1P22314 1058 aaKnown RBP18.2■□□□□ 0.5
CDK4-206ENST00000549606 TMTC2Q8N394 836 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 USP38Q8NB14 1042 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 TMEM87BQ96K49 555 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 CTAGE1Q96RT6 745 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 SPZ1Q9BXG8 430 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
CDK4-206ENST00000549606 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
CDK4-206ENST00000549606 HAS3O00219 553 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 RXRAP19793 462 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
CDK4-206ENST00000549606 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 LRRC8DQ7L1W4 858 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 CMTR1Q8N1G2 835 aaKnown RBP18.19■□□□□ 0.5
CDK4-206ENST00000549606 SMARCC2Q8TAQ2 1214 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 DHX38Q92620 1227 aaKnown RBP18.19■□□□□ 0.5
CDK4-206ENST00000549606 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 DOCK5Q9H7D0 1870 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 VCANP13611 3396 aa18.19■□□□□ 0.5
CDK4-206ENST00000549606 SH2B2O14492 632 aaPredicted RBP18.18■□□□□ 0.5
CDK4-206ENST00000549606 PLEKHA8P1O95397 391 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 CKBP12277 381 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 SELPP16109 830 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 MRPS9P82933 396 aaKnown RBP18.18■□□□□ 0.5
CDK4-206ENST00000549606 ADGRE1Q14246 886 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 NECTIN1Q15223 517 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
CDK4-206ENST00000549606 GNPTABQ3T906 1256 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 USP17L6PQ6QN14 398 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 SKAP1Q86WV1 359 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 CUL5Q93034 780 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 BCAS3Q9H6U6 928 aa18.18■□□□□ 0.5
CDK4-206ENST00000549606 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 HOXD8P13378 290 aaPredicted RBP18.17■□□□□ 0.5
CDK4-206ENST00000549606 SMARCA1P28370 1054 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 GNAQP50148 359 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
CDK4-206ENST00000549606 PTK7Q13308 1070 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 SRBD1Q8N5C6 995 aaKnown RBP18.17■□□□□ 0.5
CDK4-206ENST00000549606 PHOSPHO2Q8TCD6 241 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 LRRC2Q9BYS8 371 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 CHD7Q9P2D1 2997 aa18.17■□□□□ 0.5
CDK4-206ENST00000549606 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
CDK4-206ENST00000549606 STAM2O75886 525 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 BAIAP3O94812 1187 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CA3P07451 260 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CALM1P0DP23 149 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CALM2P0DP24 149 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CALM3P0DP25 149 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 KCNJ6P48051 423 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 GPNMBQ14956 572 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 C16orf70Q9BSU1 422 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 CERS4Q9HA82 394 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 PRDM6Q9NQX0 595 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 FRMPD4Q14CM0 1322 aa18.16■□□□□ 0.5
CDK4-206ENST00000549606 MYO9BQ13459 2157 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 PTPRSQ13332 1948 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 H3BRB1 525 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 MEIS2O14770 477 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 PARNO95453 639 aaKnown RBP18.15■□□□□ 0.5
CDK4-206ENST00000549606 LIFRP42702 1097 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 RBL2Q08999 1139 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 NEDD9Q14511 834 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 HIC1Q14526 733 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 CYFIP1Q7L576 1253 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 HERC6Q8IVU3 1022 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 WNT8BQ93098 351 aa18.15■□□□□ 0.5
CDK4-206ENST00000549606 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
CDK4-206ENST00000549606 TUT1Q9H6E5 874 aaKnown RBP18.15■□□□□ 0.5
CDK4-206ENST00000549606 CUL9Q8IWT3 2517 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 hCG_1642624A0A1W2PR95 340 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 PIK3CDO00329 1044 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 FIBPO43427 364 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 NBNO60934 754 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 ICAM3P32942 547 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 ZNF618Q5T7W0 954 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 PCNX4Q63HM2 1172 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 CENPQQ7L2Z9 268 aaPredicted RBP18.14■□□□□ 0.49
CDK4-206ENST00000549606 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
CDK4-206ENST00000549606 PSTPIP2Q9H939 334 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms