RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 SP4Q02446 784 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 NECTIN1Q15223 517 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 DGKDQ16760 1214 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 UBE2SQ16763 222 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 TMCO2Q7Z6W1 182 aaPredicted RBP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 VSIG10LQ86VR7 867 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 MICU3Q86XE3 530 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 SPATA33Q96N06 139 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.19
SUDS3-203ENST00000541591 SLC4A7Q9Y6M7 1214 aa16.21■□□□□ 0.19
SUDS3-203ENST00000541591 CPA1P15085 419 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 TCTN1Q2MV58 587 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
SUDS3-203ENST00000541591 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
SUDS3-203ENST00000541591 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 PKD2L1Q9P0L9 805 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
SUDS3-203ENST00000541591 MSRAQ9UJ68 235 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 CUL9Q8IWT3 2517 aa16.2■□□□□ 0.18
SUDS3-203ENST00000541591 KIF5BP33176 963 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 PTPN11Q06124 597 aaPredicted RBP16.19■□□□□ 0.18
SUDS3-203ENST00000541591 LAMC2Q13753 1193 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 CCDC85BQ15834 202 aaPredicted RBP16.19■□□□□ 0.18
SUDS3-203ENST00000541591 ADCK5Q3MIX3 580 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 MAF1Q9H063 256 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 MTIF3Q9H2K0 278 aaKnown RBP16.19■□□□□ 0.18
SUDS3-203ENST00000541591 MLXIPQ9HAP2 919 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 TRANK1O15050 2925 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
SUDS3-203ENST00000541591 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 FRMPD4Q14CM0 1322 aa16.19■□□□□ 0.18
SUDS3-203ENST00000541591 TMEM265A0A087WTH1 108 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 ARHGEF15O94989 841 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 F2P00734 622 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 ATP2A2P16615 1042 aaKnown RBP16.18■□□□□ 0.18
SUDS3-203ENST00000541591 ADGRE1Q14246 886 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 RAB30Q15771 203 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 CYFIP1Q7L576 1253 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 SPRED2Q7Z698 418 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
SUDS3-203ENST00000541591 COL25A1Q9BXS0 654 aaPredicted RBP16.18■□□□□ 0.18
SUDS3-203ENST00000541591 SLC12A7Q9Y666 1083 aa16.18■□□□□ 0.18
SUDS3-203ENST00000541591 HAS3O00219 553 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 RFXAPO00287 272 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 MEIS2O14770 477 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 IGFBP4P22692 258 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 BFSP2Q13515 415 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 GPNMBQ14956 572 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
SUDS3-203ENST00000541591 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 TMTC3Q6ZXV5 915 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 LRRC8DQ7L1W4 858 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 CUL5Q93034 780 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 PGBD1Q96JS3 809 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
SUDS3-203ENST00000541591 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 NAP1L2Q9ULW6 460 aaPredicted RBP16.17■□□□□ 0.18
SUDS3-203ENST00000541591 CNTNAP5Q8WYK1 1306 aa16.17■□□□□ 0.18
SUDS3-203ENST00000541591 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 CDC45O75419 566 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 LGALS2P05162 132 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 CA3P07451 260 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 CKBP12277 381 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 NEK1Q96PY6 1258 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 GAS2L1Q99501 681 aaPredicted RBP16.16■□□□□ 0.18
SUDS3-203ENST00000541591 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 SLC28A3Q9HAS3 691 aa16.16■□□□□ 0.18
SUDS3-203ENST00000541591 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
SUDS3-203ENST00000541591 NBNO60934 754 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 ACTN1P12814 892 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 SELPP16109 830 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 LIFRP42702 1097 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 DEFB103AP81534 67 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 TRAF1Q13077 416 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 ZNF618Q5T7W0 954 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 FANCBQ8NB91 859 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms