RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 MYLIPQ8WY64 445 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 CUL5Q93034 780 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 SPATA33Q96N06 139 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
LRRK1-211ENST00000538064 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
LRRK1-211ENST00000538064 MYO9BQ13459 2157 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 HAS3O00219 553 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 ICAM3P32942 547 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 PBX2P40425 430 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 MRPS9P82933 396 aaKnown RBP17.19■□□□□ 0.34
LRRK1-211ENST00000538064 SP2Q02086 613 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 RBL2Q08999 1139 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 MFSD10Q14728 455 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 RAB30Q15771 203 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 HSDL1Q3SXM5 330 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 TSGA10IPQ3SY00 556 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 GDF6Q6KF10 455 aaPredicted RBP17.19■□□□□ 0.34
LRRK1-211ENST00000538064 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 CMTR1Q8N1G2 835 aaKnown RBP17.19■□□□□ 0.34
LRRK1-211ENST00000538064 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
LRRK1-211ENST00000538064 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
LRRK1-211ENST00000538064 MEIS2O14770 477 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 IQCF3P0C7M6 154 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 FOSL2P15408 326 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 KRT32Q14532 448 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 KIAA0753Q2KHM9 967 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 USP17L6PQ6QN14 398 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 C7orf31Q8N865 590 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
LRRK1-211ENST00000538064 ZNF576Q9H609 170 aa17.18■□□□□ 0.34
LRRK1-211ENST00000538064 EYSQ5T1H1 3165 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 FIBPO43427 364 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 SORBS3O60504 671 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 EXOSC10Q01780 885 aaKnown RBP17.17■□□□□ 0.34
LRRK1-211ENST00000538064 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
LRRK1-211ENST00000538064 DEFB128Q7Z7B8 93 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 MAFAQ8NHW3 353 aaPredicted RBP17.17■□□□□ 0.34
LRRK1-211ENST00000538064 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
LRRK1-211ENST00000538064 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
LRRK1-211ENST00000538064 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 MSRAQ9UJ68 235 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
LRRK1-211ENST00000538064 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 ZBBXA8MT70 800 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 SPATA31C2B4DYI2 1134 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 ACTN1P12814 892 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 NEDD9Q14511 834 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 C16orf70Q9BSU1 422 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 MLXIPQ9HAP2 919 aa17.16■□□□□ 0.34
LRRK1-211ENST00000538064 CHD9Q3L8U1 2897 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 hCG_1642624A0A1W2PR95 340 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 RCAN1P53805 252 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 RTN1Q16799 776 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 LRRC8DQ7L1W4 858 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 KCNB2Q92953 911 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
LRRK1-211ENST00000538064 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
LRRK1-211ENST00000538064 MICAL3Q7RTP6 2002 aa17.14■□□□□ 0.34
LRRK1-211ENST00000538064 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.33
LRRK1-211ENST00000538064 ZBTB43O43298 467 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 PARNO95453 639 aaKnown RBP17.14■□□□□ 0.33
LRRK1-211ENST00000538064 LGALS2P05162 132 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
LRRK1-211ENST00000538064 SELPP16109 830 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 ATP2A2P16615 1042 aaKnown RBP17.14■□□□□ 0.33
LRRK1-211ENST00000538064 PTK7Q13308 1070 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 PPP1R18Q6NYC8 613 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 NLRX1Q86UT6 975 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 SLC9A7Q96T83 725 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 SENP7Q9BQF6 1050 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 NKX2-4Q9H2Z4 354 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
LRRK1-211ENST00000538064 CKBP12277 381 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 HOXC8P31273 242 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 FUT2Q10981 343 aa17.13■□□□□ 0.33
LRRK1-211ENST00000538064 UBE2SQ16763 222 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms