RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
PAAF1-207ENST00000536003 YBX2Q9Y2T7 364 aaKnown RBP17.74■□□□□ 0.43
PAAF1-207ENST00000536003 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 MEIS2O14770 477 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
PAAF1-207ENST00000536003 TRAF1Q13077 416 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 SEMA3FQ13275 785 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 LAMC2Q13753 1193 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
PAAF1-207ENST00000536003 SESTD1Q86VW0 696 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 MAFAQ8NHW3 353 aaPredicted RBP17.73■□□□□ 0.43
PAAF1-207ENST00000536003 ALG1Q9BT22 464 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 HDAC6Q9UBN7 1215 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 GTF2IRD1Q9UHL9 959 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
PAAF1-207ENST00000536003 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 PSEN2P49810 448 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 RABGGTBP53611 331 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 HIC1Q14526 733 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 MFSD10Q14728 455 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 WNT8BQ93098 351 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 SPATA33Q96N06 139 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
PAAF1-207ENST00000536003 SEC63Q9UGP8 760 aaKnown RBP17.72■□□□□ 0.43
PAAF1-207ENST00000536003 TELO2Q9Y4R8 837 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 SLC12A7Q9Y666 1083 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 ZBBXA8MT70 800 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 HAS3O00219 553 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 CDC45O75419 566 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 MYOGP15173 224 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 SMARCA1P28370 1054 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 RTEL1Q9NZ71 1219 aa17.72■□□□□ 0.43
PAAF1-207ENST00000536003 ZNF200P98182 395 aaPredicted RBP17.71■□□□□ 0.43
PAAF1-207ENST00000536003 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
PAAF1-207ENST00000536003 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
PAAF1-207ENST00000536003 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.43
PAAF1-207ENST00000536003 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
PAAF1-207ENST00000536003 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
PAAF1-207ENST00000536003 LZTS2Q9BRK4 669 aa17.71■□□□□ 0.43
PAAF1-207ENST00000536003 MTIF3Q9H2K0 278 aaKnown RBP17.71■□□□□ 0.43
PAAF1-207ENST00000536003 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
PAAF1-207ENST00000536003 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 CALM1P0DP23 149 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 CALM2P0DP24 149 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 CALM3P0DP25 149 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 GPNMBQ14956 572 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 UBE2SQ16763 222 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 C7orf31Q8N865 590 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 FANCBQ8NB91 859 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
PAAF1-207ENST00000536003 PFKMP08237 780 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 TGFB3P10600 412 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 GNAQP50148 359 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
PAAF1-207ENST00000536003 BFSP2Q13515 415 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 USP38Q8NB14 1042 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 PRDM12Q9H4Q4 367 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 SIP14410 1827 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 LGALS2P05162 132 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 CPA1P15085 419 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 ATP2A2P16615 1042 aaKnown RBP17.69■□□□□ 0.42
PAAF1-207ENST00000536003 ICAM3P32942 547 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 RFC2P35250 354 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 RAB30Q15771 203 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 PCNX4Q63HM2 1172 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 TYW1BQ6NUM6 668 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 CYFIP1Q7L576 1253 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 TRIM50Q86XT4 487 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 CAGE1Q8TC20 777 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
PAAF1-207ENST00000536003 COL4A4P53420 1690 aaPredicted RBP17.68■□□□□ 0.42
PAAF1-207ENST00000536003 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 DLL1O00548 723 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 RBL2Q08999 1139 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 TRIM71Q2Q1W2 868 aaKnown RBP17.68■□□□□ 0.42
PAAF1-207ENST00000536003 GNPTABQ3T906 1256 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 TRAF7Q6Q0C0 670 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 LRRC8DQ7L1W4 858 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 CUL5Q93034 780 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 MSRAQ9UJ68 235 aa17.68■□□□□ 0.42
PAAF1-207ENST00000536003 FIBPO43427 364 aa17.67■□□□□ 0.42
PAAF1-207ENST00000536003 NBNO60934 754 aa17.67■□□□□ 0.42
PAAF1-207ENST00000536003 CKBP12277 381 aa17.67■□□□□ 0.42
PAAF1-207ENST00000536003 SELPP16109 830 aa17.67■□□□□ 0.42
PAAF1-207ENST00000536003 FUT2Q10981 343 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms