RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C7orf31Q8N865 590 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 KAT2BQ92831 832 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 MTIF3Q9H2K0 278 aaKnown RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 MRPS9P82933 396 aaKnown RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 SP4Q02446 784 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 MFSD10Q14728 455 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 KIAA0753Q2KHM9 967 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 HSDL1Q3SXM5 330 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 KATNAL1Q9BW62 490 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 TTYH1Q9H313 450 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 SEMA6BQ9H3T3 888 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 CXXC1Q9P0U4 656 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-225ENST00000533704 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
CAPN1-225ENST00000533704 SPDYE3A6NKU9 549 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
CAPN1-225ENST00000533704 MEIS2O14770 477 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 HMGB1P09429 215 aaKnown RBP12□□□□□ -0.49
CAPN1-225ENST00000533704 DNAJB2P25686 324 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 PBX2P40425 430 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 NAPAP54920 295 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 APOBRQ0VD83 1088 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 BFSP2Q13515 415 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 TSGA10IPQ3SY00 556 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 Q6ZUG5 572 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 HERVK_113Q902F9 699 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 CDX2Q99626 313 aaPredicted RBP12□□□□□ -0.49
CAPN1-225ENST00000533704 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN1-225ENST00000533704 BCAS3Q9H6U6 928 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 HDAC6Q9UBN7 1215 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 SNX14Q9Y5W7 946 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
CAPN1-225ENST00000533704 PIK3CDO00329 1044 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 FIBPO43427 364 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 STAM2O75886 525 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 REC8O95072 547 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 F2P00734 622 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 TGFB3P10600 412 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 HSPA4P34932 840 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 NEDD9Q14511 834 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 PCNX4Q63HM2 1172 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 WWC2Q6AWC2 1192 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 CYFIP1Q7L576 1253 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 NLRX1Q86UT6 975 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 MYLIPQ8WY64 445 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 BRF1Q92994 677 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 INPP4AQ96PE3 977 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-225ENST00000533704 GTF2IRD1Q9UHL9 959 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 SLC4A7Q9Y6M7 1214 aa11.99□□□□□ -0.49
CAPN1-225ENST00000533704 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-225ENST00000533704 LAMA2P24043 3122 aaKnown RBP11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PTPRSQ13332 1948 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PPFIA4O75335 1185 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 LGALS2P05162 132 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 IQCF3P0C7M6 154 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 ACTN1P12814 892 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 CDC27P30260 824 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 ICAM3P32942 547 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPN1-225ENST00000533704 ZNF200P98182 395 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-225ENST00000533704 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 UTP14CQ5TAP6 766 aaKnown RBP11.98□□□□□ -0.49
CAPN1-225ENST00000533704 RASIP1Q5U651 963 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 METTL7BQ6UX53 244 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PBX4Q9BYU1 374 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 EHMT1Q9H9B1 1298 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PCDHA6Q9UN73 950 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 PCDHA8Q9Y5H6 950 aa11.98□□□□□ -0.49
CAPN1-225ENST00000533704 HAS3O00219 553 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 PFKMP08237 780 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 HOXD8P13378 290 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-225ENST00000533704 FOSL2P15408 326 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 RFC2P35250 354 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 ADD1P35611 737 aaKnown RBP11.97□□□□□ -0.49
CAPN1-225ENST00000533704 ADCY7P51828 1080 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 RABGGTBP53611 331 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 RAB30Q15771 203 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 XRRA1Q6P2D8 792 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms