RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 KCNV1Q6PIU1 500 aa18.74■□□□□ 0.59
COL16A1-216ENST00000529928 GJD3Q8N144 294 aa18.74■□□□□ 0.59
COL16A1-216ENST00000529928 ANKS1AQ92625 1134 aa18.74■□□□□ 0.59
COL16A1-216ENST00000529928 WNT8BQ93098 351 aa18.74■□□□□ 0.59
COL16A1-216ENST00000529928 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
COL16A1-216ENST00000529928 PRR33A8MZF0 331 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 KDM4AO75164 1064 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 CFBP00751 764 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
COL16A1-216ENST00000529928 HTRA4P83105 476 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-216ENST00000529928 MYSM1Q5VVJ2 828 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL16A1-216ENST00000529928 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-216ENST00000529928 MRPL38Q96DV4 380 aaKnown RBP18.73■□□□□ 0.59
COL16A1-216ENST00000529928 C17orf80Q9BSJ5 609 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 JMJD4Q9H9V9 463 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 BRWD1Q9NSI6 2320 aa18.73■□□□□ 0.59
COL16A1-216ENST00000529928 HSD17B4P51659 736 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 ZNF200P98182 395 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 PTPROQ16827 1216 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 PUS10Q3MIT2 529 aaKnown RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 SERINC5Q86VE9 423 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 MYOCDQ8IZQ8 938 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 DBF4BQ8NFT6 615 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 SP7Q8TDD2 431 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 SPATA33Q96N06 139 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 SAMD11Q96NU1 681 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 ZSCAN10Q96SZ4 725 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 AMNQ9BXJ7 453 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
COL16A1-216ENST00000529928 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
COL16A1-216ENST00000529928 RSPH10B2B2RC85 870 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-216ENST00000529928 THPOP40225 353 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 GHRHRQ02643 423 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 HSDL1Q3SXM5 330 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 PLEKHG4Q58EX7 1191 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 CELF3Q5SZQ8 465 aaKnown RBP18.71■□□□□ 0.59
COL16A1-216ENST00000529928 PTCRAQ6ISU1 281 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-216ENST00000529928 ENAHQ8N8S7 591 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-216ENST00000529928 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
COL16A1-216ENST00000529928 PDCD2LQ9BRP1 358 aa18.71■□□□□ 0.59
COL16A1-216ENST00000529928 MYH6P13533 1939 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 LAMA4Q16363 1823 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 GRXCR2A6NFK2 248 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 B4E1Z4 1266 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 RGS20O76081 388 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 TGFB3P10600 412 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 MYCLP12524 364 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-216ENST00000529928 ALADP13716 330 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 IL9P15248 144 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 HIC1Q14526 733 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 TIGD5Q53EQ6 642 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
COL16A1-216ENST00000529928 MYH7BA7E2Y1 1941 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 OPLAHO14841 1288 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 GGPS1O95749 300 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 SDSP20132 328 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
COL16A1-216ENST00000529928 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
COL16A1-216ENST00000529928 EPC2Q52LR7 807 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 SAMD3Q8N6K7 520 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 NEK9Q8TD19 979 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 C16orf70Q9BSU1 422 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 ZSWIM5Q9P217 1185 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
COL16A1-216ENST00000529928 C17orf102A2RUQ5 167 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 H3BNC9 293 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 PGM5Q15124 567 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 SEPT8Q92599 483 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 ATP6V0A1Q93050 837 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 YME1L1Q96TA2 773 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 MLXIPQ9HAP2 919 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
COL16A1-216ENST00000529928 COL4A6Q14031 1691 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 H3BRB1 525 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 SORBS3O60504 671 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 CAND2O75155 1236 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 UBA1P22314 1058 aaKnown RBP18.67■□□□□ 0.58
COL16A1-216ENST00000529928 HOXC8P31273 242 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 CSPP1Q1MSJ5 1256 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 BANK1Q8NDB2 785 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 TOP1MTQ969P6 601 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 PABPC5Q96DU9 382 aaKnown RBP18.67■□□□□ 0.58
COL16A1-216ENST00000529928 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 KRT23Q9C075 422 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 TUT1Q9H6E5 874 aaKnown RBP18.67■□□□□ 0.58
COL16A1-216ENST00000529928 PCDHA1Q9Y5I3 950 aa18.67■□□□□ 0.58
COL16A1-216ENST00000529928 KLRF2D3W0D1 207 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 ZBTB5O15062 677 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 CCND2P30279 289 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 SP2Q02086 613 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 TRAF1Q13077 416 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 GPM6BQ13491 265 aa18.66■□□□□ 0.58
COL16A1-216ENST00000529928 IMMTQ16891 758 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms