RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 IQCF3P0C7M6 154 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 CALM1P0DP23 149 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 CALM2P0DP24 149 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 CALM3P0DP25 149 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 TGFB3P10600 412 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 HOXD8P13378 290 aaPredicted RBP13.97□□□□□ -0.17
SORL1-208ENST00000529445 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
SORL1-208ENST00000529445 SMARCA1P28370 1054 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 PSEN2P49810 448 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 MFSD10Q14728 455 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 GNPTABQ3T906 1256 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 CELF3Q5SZQ8 465 aaKnown RBP13.97□□□□□ -0.17
SORL1-208ENST00000529445 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 GDF6Q6KF10 455 aaPredicted RBP13.97□□□□□ -0.17
SORL1-208ENST00000529445 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 VWCEQ96DN2 955 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 SPATA33Q96N06 139 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 GAS2L1Q99501 681 aaPredicted RBP13.97□□□□□ -0.17
SORL1-208ENST00000529445 MYL10Q9BUA6 226 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 GTF2IRD1Q9UHL9 959 aa13.97□□□□□ -0.17
SORL1-208ENST00000529445 ATP2A2P16615 1042 aaKnown RBP13.96□□□□□ -0.17
SORL1-208ENST00000529445 LIFRP42702 1097 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 RNF20Q5VTR2 975 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 MYSM1Q5VVJ2 828 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 CUL5Q93034 780 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.17
SORL1-208ENST00000529445 NKX2-4Q9H2Z4 354 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 SLC28A3Q9HAS3 691 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 PCDHA11Q9Y5I1 949 aa13.96□□□□□ -0.17
SORL1-208ENST00000529445 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 RBL2Q08999 1139 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 CTAGE1Q96RT6 745 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 SLC9A7Q96T83 725 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 YBX2Q9Y2T7 364 aaKnown RBP13.95□□□□□ -0.18
SORL1-208ENST00000529445 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 REV3LO60673 3130 aa13.95□□□□□ -0.18
SORL1-208ENST00000529445 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 HAS3O00219 553 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 PIK3CDO00329 1044 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 SORBS3O60504 671 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 BAIAP3O94812 1187 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 PARNO95453 639 aaKnown RBP13.94□□□□□ -0.18
SORL1-208ENST00000529445 SELPP16109 830 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 RABGGTBP53611 331 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 PPP2R2DQ66LE6 453 aa13.94□□□□□ -0.18
SORL1-208ENST00000529445 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
SORL1-208ENST00000529445 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
SORL1-208ENST00000529445 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 NOP56O00567 594 aaKnown RBP13.93□□□□□ -0.18
SORL1-208ENST00000529445 FIBPO43427 364 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 RXRAP19793 462 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 ICAM3P32942 547 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
SORL1-208ENST00000529445 SP2Q02086 613 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 PTK7Q13308 1070 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 NEDD9Q14511 834 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 XRRA1Q6P2D8 792 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 METTL7BQ6UX53 244 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
SORL1-208ENST00000529445 PHOSPHO2Q8TCD6 241 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
SORL1-208ENST00000529445 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
SORL1-208ENST00000529445 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
SORL1-208ENST00000529445 SPATA31C2B4DYI2 1134 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 CDC45O75419 566 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 CKBP12277 381 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 KCNJ6P48051 423 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 COL9A3Q14050 684 aaPredicted RBP13.92□□□□□ -0.18
SORL1-208ENST00000529445 USP17L6PQ6QN14 398 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 MICU3Q86XE3 530 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 CMTR1Q8N1G2 835 aaKnown RBP13.92□□□□□ -0.18
SORL1-208ENST00000529445 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
SORL1-208ENST00000529445 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 XIRP2A4UGR9 3374 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 NCOR1O75376 2440 aa13.92□□□□□ -0.18
SORL1-208ENST00000529445 MEIS2O14770 477 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 LGALS2P05162 132 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 MYOGP15173 224 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 SEMA3FQ13275 785 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 CNKSR3Q6P9H4 555 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 NLRX1Q86UT6 975 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 SKAP1Q86WV1 359 aa13.91□□□□□ -0.18
SORL1-208ENST00000529445 RAB11FIP4Q86YS3 637 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms