RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 GTF2IRD1Q9UHL9 959 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 SLC27A2O14975 620 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 NBNO60934 754 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 GGPS1O95749 300 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
SRPRA-203ENST00000528744 MBTPS1Q14703 1052 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 RAB30Q15771 203 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 DGKDQ16760 1214 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
SRPRA-203ENST00000528744 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 C16orf70Q9BSU1 422 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 CERS4Q9HA82 394 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
SRPRA-203ENST00000528744 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
SRPRA-203ENST00000528744 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
SRPRA-203ENST00000528744 MEIS2O14770 477 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 PRC1O43663 620 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 F2P00734 622 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 CKBP12277 381 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 UBA1P22314 1058 aaKnown RBP13.38□□□□□ -0.27
SRPRA-203ENST00000528744 MFSD10Q14728 455 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 KRT40Q6A162 431 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 SLC28A3Q9HAS3 691 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
SRPRA-203ENST00000528744 ERICH2A1L162 156 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 PPFIA4O75335 1185 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 CA3P07451 260 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 IGFBP4P22692 258 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 BFSP2Q13515 415 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 SAMD3Q8N6K7 520 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRPRA-203ENST00000528744 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
SRPRA-203ENST00000528744 TTC28Q96AY4 2481 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 REV3LO60673 3130 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 LCHNA4D1U4 455 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 ATP9AO75110 1047 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 CXCL10P02778 98 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 PFKMP08237 780 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 SELPP16109 830 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 CCND2P30279 289 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 ICAM3P32942 547 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 RFC2P35250 354 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 DEFB103AP81534 67 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 TAP1Q03518 808 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 RBL2Q08999 1139 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 ZNF618Q5T7W0 954 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 PPP2R2DQ66LE6 453 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 CCDC82Q8N4S0 544 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 INPP4AQ96PE3 977 aaPredicted RBP13.36□□□□□ -0.27
SRPRA-203ENST00000528744 GAS2L1Q99501 681 aaPredicted RBP13.36□□□□□ -0.27
SRPRA-203ENST00000528744 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
SRPRA-203ENST00000528744 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
SRPRA-203ENST00000528744 TGFB3P10600 412 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 LRRC8DQ7L1W4 858 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 PHOSPHO2Q8TCD6 241 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 AFAP1L1Q8TED9 768 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 MAP3K14Q99558 947 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
SRPRA-203ENST00000528744 TREHO43280 583 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 DDAH1O94760 285 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 LGALS2P05162 132 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 SMARCA1P28370 1054 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 HOXC8P31273 242 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 MCM5P33992 734 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 WDR5P61964 334 aaKnown RBP13.34□□□□□ -0.27
SRPRA-203ENST00000528744 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
SRPRA-203ENST00000528744 PTK7Q13308 1070 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
SRPRA-203ENST00000528744 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.34□□□□□ -0.27
SRPRA-203ENST00000528744 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 GPR20Q99678 358 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 BRPF3Q9ULD4 1205 aa13.34□□□□□ -0.27
SRPRA-203ENST00000528744 H3BRB1 525 aa13.33□□□□□ -0.28
SRPRA-203ENST00000528744 LPXNO60711 386 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms